KEGG   Oncorhynchus mykiss (rainbow trout): 110486085
Entry
110486085         CDS       T07259                                 
Name
(RefSeq) serum response factor isoform X1
  KO
K04378  serum response factor
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110486085
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110486085
Transcription factors [BR:omy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   MADS-box responders to external signals
    110486085
SSDB
Motif
Pfam: SRF-TF
Other DBs
NCBI-GeneID: 110486085
NCBI-ProteinID: XP_021413101
Ensembl: ENSOMYG00000031869
LinkDB
Position
13:complement(30325202..30352644)
AA seq 523 aa
MLGGNGAGIGTRAGAARPGNGTGLTTLQVNHPGTNMSGAEGGRFDDRIRQYSADVVYSGS
EPESDSGEDDETMGSAGDKRGVKRERAEMEVAASATSVGLPPGGYGGATGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDSCTEPTKDM
MKPTFTMANLPAGVNTQPTSTSSSSTTSSVAMHLQNSIPATCWQVSAGINTHSATSCANG
TVLKTSATSTSVMLPGGFTLMSGAPLPLGTHTIPLSQLQALQGPLAQTSITTAGHTQQGQ
QTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSNSTVSLPTTIVTSS
VPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQVFLTGHP
GTVQIPVSAVQLHPMMIGQQSSSSNLTELQVVNLDAQHHSKDD
NT seq 1572 nt   +upstreamnt  +downstreamnt
atgttggggggaaacggggcaggaataggtacaagagcaggggccgcacgacctggaaat
gggactgggttgaccactctgcaagttaatcacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagacagtactcagccgacgtggtgtacagcggctct
gaaccagagtccgactccggggaggatgatgagaccatgggttcagccggggacaaaaga
ggggtgaaacgggagagagctgagatggaagtcgctgcatcggcgacgtctgtggggcta
cccccgggaggttatggcggtgcaacaggggcaaagccaggcaagaaaacccgcggacga
gtcaagatcaaaatggaatttatagacaacaaacttcggcggtacacaacttttagcaag
aggaagactggcattatgaagaaggcctacgagctctccactctaacgggaacccaggtc
ctcctcctggtggccagcgagacaggccacgtctacacatttgccacacgcaagctccag
cccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctcaactcacctgac
tcgccgccccgcaatgacccgtccaccgaccagcgcatgagcgccacaggcttcgaggag
acggacctcacctaccaggtgtcggagggtgacagctgcacagagcccaccaaggacatg
atgaagccgaccttcaccatggccaatctgcctgccggtgtcaacacccaacctacgtcg
acgtcttcttcctccaccacctcctccgtggccatgcacttgcagaacagcatccctgcc
acctgctggcaggtctcggcgggcatcaatactcacagtgccaccagctgtgccaacggc
acggtgctgaagacctcggccacgtcaacgagcgtcatgctacctggagggttcaccctc
atgtccggcgcaccgcttccccttggcacgcacaccattccactcagtcagctgcaggcc
ctccagggccccttggcccagaccagcatcaccaccgcagggcacacccagcagggccag
cagaccaccctgctccgcctacctgcaactgtctcgctcacaggcggagggatgggccag
cagctgcaggccatccaggttcaccccagcagccagcagagctctgtgagccatagtgac
ctttcccacatcacaagcaactccacagtgagcctccccaccaccatcgtcacgtcctca
gtgccctcatcgatgggtggtcacatgatgtaccccggcgcccacactgttatgtacgcc
acacctacaacctcgttgggcgacggcagtctgaccgtgcttaacaccttcccacagaca
gcccatacacagtcccatgaccccggcgctgtatcgcaggtgttcctcacaggacatcct
gggacagttcagatccctgtgtcagcagtgcagctccacccgatgatgattggtcagcag
tcaagcagcagcaacctcacagagcttcaagtggtcaacctggacgcccagcatcactca
aaggatgattga

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