Oncorhynchus mykiss (rainbow trout): 110486085
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Entry
110486085 CDS
T07259
Name
(RefSeq) serum response factor isoform X1
KO
K04378
serum response factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110486085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110486085
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
110486085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
110486085
NCBI-ProteinID:
XP_021413101
Ensembl:
ENSOMYG00000031869
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Position
13:complement(30325202..30352644)
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AA seq
523 aa
AA seq
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MLGGNGAGIGTRAGAARPGNGTGLTTLQVNHPGTNMSGAEGGRFDDRIRQYSADVVYSGS
EPESDSGEDDETMGSAGDKRGVKRERAEMEVAASATSVGLPPGGYGGATGAKPGKKTRGR
VKIKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQ
PMITSETGKALIQTCLNSPDSPPRNDPSTDQRMSATGFEETDLTYQVSEGDSCTEPTKDM
MKPTFTMANLPAGVNTQPTSTSSSSTTSSVAMHLQNSIPATCWQVSAGINTHSATSCANG
TVLKTSATSTSVMLPGGFTLMSGAPLPLGTHTIPLSQLQALQGPLAQTSITTAGHTQQGQ
QTTLLRLPATVSLTGGGMGQQLQAIQVHPSSQQSSVSHSDLSHITSNSTVSLPTTIVTSS
VPSSMGGHMMYPGAHTVMYATPTTSLGDGSLTVLNTFPQTAHTQSHDPGAVSQVFLTGHP
GTVQIPVSAVQLHPMMIGQQSSSSNLTELQVVNLDAQHHSKDD
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttggggggaaacggggcaggaataggtacaagagcaggggccgcacgacctggaaat
gggactgggttgaccactctgcaagttaatcacccaggaacgaacatgagtggtgccgaa
ggtggaaggtttgacgaccgaatcagacagtactcagccgacgtggtgtacagcggctct
gaaccagagtccgactccggggaggatgatgagaccatgggttcagccggggacaaaaga
ggggtgaaacgggagagagctgagatggaagtcgctgcatcggcgacgtctgtggggcta
cccccgggaggttatggcggtgcaacaggggcaaagccaggcaagaaaacccgcggacga
gtcaagatcaaaatggaatttatagacaacaaacttcggcggtacacaacttttagcaag
aggaagactggcattatgaagaaggcctacgagctctccactctaacgggaacccaggtc
ctcctcctggtggccagcgagacaggccacgtctacacatttgccacacgcaagctccag
cccatgattaccagtgagacgggcaaggcgctcatccagacgtgcctcaactcacctgac
tcgccgccccgcaatgacccgtccaccgaccagcgcatgagcgccacaggcttcgaggag
acggacctcacctaccaggtgtcggagggtgacagctgcacagagcccaccaaggacatg
atgaagccgaccttcaccatggccaatctgcctgccggtgtcaacacccaacctacgtcg
acgtcttcttcctccaccacctcctccgtggccatgcacttgcagaacagcatccctgcc
acctgctggcaggtctcggcgggcatcaatactcacagtgccaccagctgtgccaacggc
acggtgctgaagacctcggccacgtcaacgagcgtcatgctacctggagggttcaccctc
atgtccggcgcaccgcttccccttggcacgcacaccattccactcagtcagctgcaggcc
ctccagggccccttggcccagaccagcatcaccaccgcagggcacacccagcagggccag
cagaccaccctgctccgcctacctgcaactgtctcgctcacaggcggagggatgggccag
cagctgcaggccatccaggttcaccccagcagccagcagagctctgtgagccatagtgac
ctttcccacatcacaagcaactccacagtgagcctccccaccaccatcgtcacgtcctca
gtgccctcatcgatgggtggtcacatgatgtaccccggcgcccacactgttatgtacgcc
acacctacaacctcgttgggcgacggcagtctgaccgtgcttaacaccttcccacagaca
gcccatacacagtcccatgaccccggcgctgtatcgcaggtgttcctcacaggacatcct
gggacagttcagatccctgtgtcagcagtgcagctccacccgatgatgattggtcagcag
tcaagcagcagcaacctcacagagcttcaagtggtcaacctggacgcccagcatcactca
aaggatgattga
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integrated database retrieval system