Oncorhynchus mykiss (rainbow trout): 110486107
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Entry
110486107 CDS
T07259
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00310
Lysine degradation
omy00514
Other types of O-glycan biosynthesis
omy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
110486107
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
110486107
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
omy01003
]
110486107
Enzymes [BR:
omy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
110486107
Glycosyltransferases [BR:
omy01003
]
O-Glycan biosynthesis
O-linked Gal type
110486107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
CAP59_mtransfer
DUF6492
Motif
Other DBs
NCBI-GeneID:
110486107
NCBI-ProteinID:
XP_036796654
Ensembl:
ENSOMYG00000034968
LinkDB
All DBs
Position
13:complement(31208978..31235931)
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AA seq
609 aa
AA seq
DB search
MHRYIFLLSIALTLLFSGPAQGYFPEERWSPESPLLAPRVLIALVCRNSEHSLPYFLGTI
ERLNYPKDRVAVWVATDHNVDNTTAILRDWLVKVQKLYHYVEWRPQEEPTEYQDADSPKQ
WTNLRYAHVMKLRQAALDSAREMWADYFMVVDCDNLLTNPNVLWKLIKENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLIDLRKEASRQLAFHP
PHPDYSWAFDDIIVFAFSAHMADVQMFLCNRETYGYFPVPLRAHNSLTDEADSFLHSLLE
VNVRNPHVLPSEYIPAPVKIQDKLGFDEVFMINLKKRTDRRDRMLRTLYEQEIACKVIQA
VDGKAMNISEINALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEISERGLKSSLVI
EDDLRFEVFFKRRLMNLMSEVESQGLDWDLIYIGRKRMQVDRPEKSVPNIHNLVEADYSY
WTLGYMMSLQGAQKLLRAEPLKRILPVDEFLPVMFNKHPVLDYMEHFEERDLKAFSAEPL
LVFPTHYTGDAGYISDTETSVVWDNEKVRTDWDRARSGKTQEQAEISSEAQNSDVLQSPL
DSTATRDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgcaccggtacatcttccttctgtccatcgccctgacgttactgttttccggaccagct
caaggatacttccccgaagaacgctggagccccgaatcaccacttcttgcccctcgggtc
ctcattgcccttgtctgccgcaactctgaacattctctgccttatttccttggaactatc
gaacgtctgaattatcccaaggaccgcgtggcagtttgggtagcgacggaccacaatgtg
gacaacactacagccatcctgcgtgactggctcgtcaaggtccaaaaactctaccactat
gtggagtggaggccgcaggaggagcccacagagtaccaggatgcagacagcccgaagcag
tggaccaacctccgctacgcacacgtgatgaagttgcggcaggcagcactggactccgca
agagaaatgtgggcagactacttcatggtggtggactgtgataacctattgaccaatcct
aatgtactgtggaagctcatcaaggagaacaagaccatcgtagctcccatgttagagtcc
cgtgcagcctactccaacttctggtgtggcatgacctcccagggttattataagcgcacc
ccggcctacatccctatgagaaagcaggtgcgtaaaggatgcttcgcagttcccatggtg
cactccaccttcctgattgacttgaggaaggaggcgtcacgccagttggccttccacccc
cctcacccagactacagctgggccttcgatgacatcattgtcttcgccttctccgctcac
atggcagatgtgcagatgttcctatgtaacagagagacgtatgggtatttccccgtgcca
ctgcgagcccacaactccctgacagatgaagcagacagcttcctgcattccttgttggag
gtcaatgtgcggaaccctcatgtgctgccttcggagtacatcccggcccccgtaaagata
caagataagctgggctttgatgaggtgttcatgatcaacttaaagaaacggaccgaccgg
cgggatcgcatgctgaggactctgtacgagcaagagattgcctgcaaggtcattcaagcg
gtagacggcaaagcgatgaacatcagtgagatcaatgccctggggatccacatgctacca
ggctacagtgacccgtaccacggtaggcccctcaccaagggagagctgggctgcttcctc
tcacactacaacatctggaaagagatctcagagcggggtctaaagagttccctggtgatc
gaggacgatctgcgtttcgaggtcttcttcaagcgacgcctgatgaacctgatgagtgaa
gtggagagccagggtctagactgggacctgatttatatcggcagaaagaggatgcaggtg
gaccgccctgagaagtccgtacccaatatacacaacctggtggaggccgactactcctat
tggacgctgggctatatgatgtcattacaaggagcccagaagctgctgagggcagagccg
ttgaagaggatattacccgtggatgagttcctccctgtcatgttcaataaacaccctgtc
ttggactacatggagcactttgaggagcgggacctgaaggccttctcggccgagcccctg
ctagtgttccccactcactacacaggagacgcgggctacatcagcgacacagagacctcc
gtggtgtgggacaacgagaaggtgcgtacggactgggaccgggcccgctcggggaagacc
caggagcaggcggagatcagcagcgaggcccagaactctgacgtactccagtcacctctg
gacagcacagccacacgggatgaactatga
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