KEGG   Oncorhynchus mykiss (rainbow trout): 110486122
Entry
110486122         CDS       T07259                                 
Name
(RefSeq) girdin isoform X1
  KO
K23284  C1q-related factor
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110486122
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Opsonins
    110486122
SSDB
Motif
Pfam: C1q FKBP15 Shugoshin_N CCDC39 ATG16 DUF7310 bZIP_2 SlyX bZIP_1 GAS Rod_CreS HH_AprE ZapB Tropomyosin GIT_CC Uso1_p115_C TMF_DNA_bd SPAM DivIC DUF724 ANG-1 Filament Cnn_1N ACBP4_C MAD UPF0242 Rab11-FIP3 Phage_scaffold MscS_porin Myosin_tail_1 CC_Bre1 CCDC113_CCDC96_CC CCDC-167 LIP-1 RIMB1_N PUMA_CC ADIP CCDC22_CC Leu_zip BLOC1_2 CENP-F_leu_zip CALCOCO1 Mod_r HMMR_N Nup54 DUF5798 TACC_C CC_Liprin_beta DUF4472 FPP Yuri_gagarin DUF3450 TPR_MLP1_2 MbeD_MobD NET2A KASH_CCD Nucleoprot-TPR Fib_alpha TPR
Other DBs
NCBI-GeneID: 110486122
NCBI-ProteinID: XP_021413169
Ensembl: ENSOMYG00000016926
UniProt: A0A8C7QHW6
LinkDB
Position
2:complement(29460944..29470038)
AA seq 672 aa
MRGVVAMLVLMFYLSGAWAEGESKGGMDQIDQNILFTTIDAVWDELYHLRLMLNNTKKRV
EKLENKNTVLEARVTASESQVVELKKENAALEARMTASESQVDEVKKENAVLEARVTASE
SRVAELKKENAALEARSTASESQLKDLKGKNADLEARQTTSENQVEDLKKENAGQAALML
SLESRLTALQSQMAELKKENADQAAQLSALGNTVTASESQVAELMAKNAALEARVTVSES
HVAELKGKNAALEARVTASEKQVEELEKENADQAAQLLSLGSRVATLQSQVAELKKENAA
LEARVTASEKQVAELMGKNTALESRVTVSENHVAELKAKNAALEARVTASEKQVEELEKE
NADQVAELLSLGSRVTTLQSQVAELKKQNAAQAVELSDLKNRVTTSESQVAELKKVNAAL
DTRLTASERQVAELKKANAALEARVTVGESHVADLEKNNAALRTRVTANESKLDELKKEN
AAQAAELSDLKNRVTTSESQVAELKKENAALEARLSVAESQVEELRLDRRQVAFSVGLTD
SGYVGPFQTEITLVYEKIFTNIGNGYDTNSGMFSAPVRGVYYFTFTSMGREPGQKMGVFL
VKNGEQMIYNVQDNFHGGYEYMTGAVALELEKDDLVYLRLPKGWGLYDDNYNHIVFTGIL
LFTTNPAMGLLH
NT seq 2019 nt   +upstreamnt  +downstreamnt
atgaggggtgttgtagctatgctggtgctgatgttctatctgtctggggcctgggctgag
ggagagagtaaaggagggatggatcagattgaccagaacattctattcactaccatagat
gctgtctgggatgagctgtatcacctgagactcatgctgaacaacacaaagaaacgagta
gagaagttggagaataagaacacagtcctggaggccagagtgacagccagtgagagccag
gtggtggaactgaagaaagagaatgcagcgctggaggccagaatgacagccagtgagagc
caggtggacgaagtgaagaaagagaatgcagtcttggaggccagagtgacagccagtgag
agtcgggtagcggaactgaagaaagagaatgcagccctggaggccagatccacagccagt
gagagccagctgaaggatctgaaggggaagaatgcagacctggaggccagacagacaacc
agtgagaaccaggtggaagacttgaagaaagagaatgcaggccaagcagcactaatgtta
tccttggaaagccgactaacagcccttcagagccagatggcagaactgaagaaagagaat
gcagatcaagcagcacagctgtcagccctggggaacacagtgaccgccagtgagagccag
gtggcagagctgatggccaaaaatgcagccctggaggccagagtgacagtcagtgagagt
catgtggcagaactgaagggaaagaacgcagccctggaggccagagtgacagccagtgag
aaacaggtggaggagctggagaaagagaatgcagaccaagcagcacaactgttatccttg
gggagcagagtggcaacccttcagagccaggtggcagaactgaagaaagagaatgcagcc
ctggaggccagagtaacagccagtgagaagcaggtggcagaactgatgggaaagaataca
gccctggagtccagagtgacagtcagtgagaatcatgtggcagaactgaaggcgaagaac
gcagccctggaggccagagtgacagccagtgagaaacaggtggaggagctggagaaagag
aatgcagaccaagtagctgaactgttatccttggggagcagagtgacaacccttcagagc
caggtggcagaactgaagaaacagaatgcagcccaagcagtagaactgtcagacttgaag
aacagagtgacaaccagtgagagccaggtagctgaactgaagaaagtaaatgcagccctg
gacaccagattgacagccagcgaaaggcaggtggcagaactgaagaaagcgaatgcagcc
ctggaggccagagtgacagtaggtgagagtcatgtggcagacctggagaaaaataatgca
gccttgaggaccagagtgacagccaatgagagcaagctggatgaactgaagaaagagaat
gcagcccaagcagcagaactgtcagacttgaagaacagagtgacaaccagtgagagccag
gtggcagagttgaagaaagagaatgcagccctggaggcaagattgagtgtcgctgagagc
caggtggaggaactgaggctagacagaagacaggtggccttttctgttggtttgacggac
tcaggatatgtgggaccctttcaaactgagatcactctggtctatgaaaaaatcttcacc
aacatcggcaacggttacgacacaaactctggtatgttttcagcaccagtgagaggagtc
tactacttcacattcacctccatgggccgagagcctggacagaaaatgggtgttttcttg
gtcaaaaatggagagcaaatgatatacaacgtccaggacaacttccatggtggttatgag
tatatgacaggcgccgtggctctggagctagagaaagatgacctggtgtacttaaggctt
cctaagggctgggggctgtacgatgacaactacaaccacattgtctttactggcatcctg
ctcttcaccaccaaccctgctatgggcctactccactag

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