KEGG   Oncorhynchus mykiss (rainbow trout): 110486231
Entry
110486231         CDS       T07259                                 
Name
(RefSeq) integrin beta-3
  KO
K06493  integrin beta 3
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03266  Virion - Herpesvirus
omy04081  Hormone signaling
omy04145  Phagosome
omy04148  Efferocytosis
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
omy05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    110486231
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    110486231
   04512 ECM-receptor interaction
    110486231
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110486231
   04148 Efferocytosis
    110486231
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110486231
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110486231
   04810 Regulation of actin cytoskeleton
    110486231
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    110486231
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110486231
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110486231
   04515 Cell adhesion molecules [BR:omy04515]
    110486231
   04090 CD molecules [BR:omy04090]
    110486231
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    110486231
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110486231
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin beta subunits
   110486231
CD molecules [BR:omy04090]
 Proteins
  110486231
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin PSI_integrin I-EGF_1 EGF_2 EGF_TEN
Other DBs
NCBI-GeneID: 110486231
NCBI-ProteinID: XP_021413350
Ensembl: ENSOMYG00000014250
UniProt: A0A8C7VNJ3
LinkDB
Position
13:complement(36307625..36331668)
AA seq 787 aa
MGTFLDRLWIFSGLLLASSEVLGSNICTSRGVSTCRQCLAIHPSCAWCFKEEFGQGGSSV
SRCDLKQNLLDGGCTKGELEFPFSTLSVQENTPLSDKASGAADDVTQIRPQKLSLTLRPD
DARRFTVTVKQVEDYPVDLYYLMDLSYSMKDDLARLRSLGNQLAAAMGRTTSNLRMGFGA
FVDKPLSPYMYTYPEEAISNPCYGIQTRCLPQFGYKHVLSLTKQVERFTEEVAKQQVSRN
RDSPEGGFDAVIQAVVCKDKIGWRGDASHLLVFTTDATTHIALDGRLAGLVQPNDGHCHI
DRDNNYDKSSTLDYPSLALITEKMSENNINLIFAVTNNVMPLYQNYSQLIPGTTVGTLSD
DSGNVIQLILDAYERIRSKVELELLGVPEELALSFNATCLNGELIQGLKSCSGLKIGDTV
SFSVEARLRGCPKEKNRTFTIKPVGFKDALEVTVHFACGCDCEATAQPESPLCNQGNGTY
ECGVCQCHPGRLGDRCECADGDYRPSDQGNCSPKPDDPICSGRGNCVCGQCSCHTSGFGK
VWGKYCECDDFNCLRFKGEICSGHGKCDCGFCKCGSDWMGENCNCTTRTDTCMSSMGLLC
SGRGQCVCGACECTQPGAYGATCERCPTCPDACSIKKECVECKHFKRGRLFEEKSCGRIC
RDEIQKVEELVFYEKNAVNCTYKDENDCVERFQYYEDASGKSILYVMEPDCPKGPDILVV
LMAVAGAILFLGLAGLLIWKLLVTIHDRREFAKFEEERAKAKWDTANNPLYKGATTTFTN
VTYRGNS
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgggaacttttttagaccgtctatggatattttctggtttattattagcttcttctgaa
gttcttggctcaaacatctgcacttctcgaggggtgagcacctgcagacagtgtttggct
atccaccctagctgtgcttggtgctttaaggaagagtttggccaagggggctccagtgtg
tcccgttgtgacctgaagcagaacctgttggatggggggtgtacgaagggggagctagag
ttccccttcagtaccctcagtgtgcaagaaaacacgcccctcagtgacaaggcatcgggg
gctgctgacgacgtcacccagatcagaccccagaaactcagcctcactctgagaccagat
gatgccaggcgtttcacagtgacagtgaagcaggtggaggactacccagttgacctgtac
tatctgatggacctctcctactccatgaaggacgacttggcccgcctgcgctccctgggc
aaccagctggctgcagccatgggccgcaccaccagcaacctgcgtatgggctttggggcc
tttgtggacaagcccctgtccccatatatgtacacctaccctgaggaagcaatcagtaac
ccttgctatgggatccagacgcggtgcctgcctcagtttggctacaagcacgtgctgtct
ctgaccaagcaggtggagcgcttcaccgaggaggtggcgaagcagcaggtgtctcgtaac
agagactctccagagggaggcttcgacgcggtcatacaggcagtggtgtgcaaggacaag
ataggctggcgtggggatgcctcccacctgttggtgttcactaccgatgctacgacacac
atagccctggacggccggctggctggtctagtgcagcccaatgatggacattgtcacatc
gacagagacaacaactatgacaagtcgtcaaccctggactacccctctctggctctgatc
acagagaagatgtctgagaacaacatcaacctcattttcgctgtgaccaacaatgtgatg
cccctctaccagaactacagccagctgattcctggcaccacggttggaacgctgtcggat
gactctgggaatgtgatccaactcatcctggatgcttacgagaggatccgttccaaggtg
gaattggagttgctgggtgttccagaggagctggctctgtccttcaacgccacctgcctc
aacggagagctcatccagggactcaagtcctgctccgggcttaagatcggagacacagtg
tcgttcagtgtggaggcaaggttacgcggctgccctaaggagaagaatcgtaccttcacc
attaaacctgtgggcttcaaggacgctctggaggttacggtccacttcgcctgcgggtgt
gactgtgaggccacagcccagcccgagagccctctctgtaaccagggaaatgggacctac
gagtgtggtgtgtgccagtgtcacccggggcgcctgggagaccgatgtgagtgtgccgac
ggggactacaggccctcagaccagggcaactgtagccccaaacctgatgaccccatctgc
agtgggaggggcaactgtgtgtgtggccaatgctcctgccacactagtggctttggaaag
gtgtggggcaagtactgcgaatgtgacgacttcaactgcctgcgcttcaaaggagagatc
tgctcaggccatgggaaatgtgactgtggcttctgcaagtgtggctctgactggatgggg
gagaactgtaactgcacaacccggacagacacctgcatgtccagcatgggcctgctgtgc
agcggccggggccagtgtgtgtgtggggcctgtgagtgcacccagccaggggcctacggg
gccacttgtgagaggtgtccaacctgccctgatgcctgcagcatcaagaaggaatgtgtt
gaatgtaagcacttcaagagaggccgtctctttgaggagaaaagctgtggccgaatctgc
agggatgaaattcagaaggtggaagaactagtcttctatgagaagaatgctgtgaactgc
acctataaggatgagaatgactgtgtagagcgcttccagtactacgaggatgccagcgga
aagtccatcctgtatgtcatggagcctgactgccctaaagggcctgatatcctggtggtt
ctcatggcggtggcgggggccatcttgtttctgggtctggctggcctgctcatctggaag
ctgctggtcaccatccacgaccgccgagagttcgccaagtttgaggaggagagggccaag
gccaagtgggatacggctaacaaccccttgtacaaaggagccaccaccactttcaccaat
gtgacctaccgtgggaactcttga

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