Oncorhynchus mykiss (rainbow trout): 110486260
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Entry
110486260 CDS
T07259
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04145
Phagosome
omy04148
Efferocytosis
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110486260
04145 Phagosome
110486260
04137 Mitophagy - animal
110486260
04148 Efferocytosis
110486260
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110486260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110486260
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110486260
04031 GTP-binding proteins [BR:
omy04031
]
110486260
Membrane trafficking [BR:
omy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
110486260
Endosome - Lysosome transport
110486260
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110486260
Exosomal proteins of other body fluids (saliva and urine)
110486260
Exosomal proteins of colorectal cancer cells
110486260
Exosomal proteins of bladder cancer cells
110486260
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
110486260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
Motif
Other DBs
NCBI-GeneID:
110486260
NCBI-ProteinID:
XP_021413388
Ensembl:
ENSOMYG00000005290
LinkDB
All DBs
Position
13:complement(37133819..37151534)
Genome browser
AA seq
219 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcagccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaaatccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaagctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaatatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggaagcaagtgctgtggtgggaactaa
DBGET
integrated database retrieval system