KEGG   Oncorhynchus mykiss (rainbow trout): 110486260
Entry
110486260         CDS       T07259                                 
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137  Mitophagy - animal
omy04144  Endocytosis
omy04145  Phagosome
omy04148  Efferocytosis
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110486260
   04145 Phagosome
    110486260
   04137 Mitophagy - animal
    110486260
   04148 Efferocytosis
    110486260
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110486260
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110486260
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110486260
   04031 GTP-binding proteins [BR:omy04031]
    110486260
Membrane trafficking [BR:omy04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    110486260
 Endosome - Lysosome transport
    110486260
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110486260
  Exosomal proteins of other body fluids (saliva and urine)
   110486260
  Exosomal proteins of colorectal cancer cells
   110486260
  Exosomal proteins of bladder cancer cells
   110486260
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    110486260
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta
Other DBs
NCBI-GeneID: 110486260
NCBI-ProteinID: XP_021413388
Ensembl: ENSOMYG00000005290
LinkDB
Position
13:complement(37133819..37151534)
AA seq 219 aa
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNEPAGGAGGRAGGRAGVDLQEAAPQAGGSKCCGGN
NT seq 660 nt   +upstreamnt  +downstreamnt
atggcaggtcgaggaggaccagcacggaccaacggcgcggcagccagcaacaagatctgc
cagttcaagctggtgctgctgggagagtcagcggtgggcaaatccagcttggtgctgcgc
tttgtcaagggccagttccacgagtaccaggagagcaccatcggagctgccttcctcaca
cagactgtctgcttggatgacacaacagttaagtttgagatctgggacactgcagggcag
gaacggtatcacagcctggcccctatgtactacagaggagcgcaagctgccatcgtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccaa
cgacaagccagccctaatatcgttattgcactggcagggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcgtacgcagatgacaacagtttgctcttc
atggagacttcagccaagacggccatgaacgtcaatgagatctttatggccatagccaag
aagcttcctaagaacgagccagcgggtggagccggtggccgggccggtggtcgggcagga
gtggacctgcaggaagccgccccacaggctggtggaagcaagtgctgtggtgggaactaa

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