Oncorhynchus mykiss (rainbow trout): 110486382
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Entry
110486382 CDS
T07259
Symbol
notch3
Name
(RefSeq) neurogenic locus notch homolog protein 3
KO
K20995
Notch 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04330
Notch signaling pathway
omy04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
110486382 (notch3)
04371 Apelin signaling pathway
110486382 (notch3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
Ank_2
EGF_2
Ank
Notch
NODP
NOD
EGF_3
Ank_3
Ank_4
Ank_5
EGF_DL_JAG
EGF_Teneurin
Plasmod_Pvs28
cEGF
DUF7472
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
110486382
NCBI-ProteinID:
XP_036797002
Ensembl:
ENSOMYG00000042475
LinkDB
All DBs
Position
13:41460389..41507736
Genome browser
AA seq
2473 aa
AA seq
DB search
MGGNYNVWIFLPILFLVHNCEGFRCLDKYRPCDNGGTCIDSPSRCICRPGYIGPLCQSLD
PCHRSPCLNGAACKSQVANGMPQFTCVCQRGFRGQDCSLIDACATSPCANGARCASWNNH
YNCSCPPGFQGKNCRNDIDECRKSGACLNAGLCMNTHGSFRCQCPPGYSGRTCEVSSLPC
APSQCINGGTCRPTGDHTYDCACLPGFEGHNCETNVDDCPGHRCMNGGLCVDGVNTYNCQ
CSPEWTGQYCAEDVNECLMQPNACHNGGTCFNTIGGHTCVCVNGWTGDDCSENIDDCATA
VCFNGATCHDRVASFFCECPVGKTGLLCHLDDACVSNPCNEGAVCDTNPLNGRAICTCPA
GFVGGACNQDMDECSIGANPCEHFGKCVNTEGSFQCQCGRGYAGPRCEIDINECLSMPCQ
NDATCLDRIGEFTCICMPGYMGTYCEVDVDECESNPCVNDGICRDMVNGFTCTCQPGFTG
TMCQIDIDECASTPCQNGAKCYDRPNGYECRCAEGYEGTLCESNTNNCQPDPCHHGTCVD
GIASYTCNCDAGYTGYRCENQLNECHSNPCQNGGKCVDLVNKYICQCQHGTSGTNCEINF
DDCASKPCDYGICKDGINRYDCVCKPGFTGPLCNVEMDECSSGPCRNGGTCVDEENGFHC
QCPEGFQPPYCYSQVDECGSNPCVHGACRDDINGYRCDCEPGWVGKNCDLDRNDCLPSPC
QNAGTCIDQLNGFTCKCRQGFRGNLCQVNINECSSSPCLNQGTCVDGVASFTCLCELPYS
GPTCADVLTPCSPNPCANHALCTNTPDYLGYQCNCQQGWQGQLCNIDVNECIANPCKNRG
TCTNTLGGFMCSCRGGFTGPNCETDINDCAPNPCLSGGSCTDGVNSFHCSCLPGFTGPRC
AVEVNECQSAPCKNGGTCTDYVNSYTCTCRPGFTGINCETNIPDCTESSCFNGGTCTDKI
NGYSCTCRSGFTGSHCQYEVNECDSQPCLNGGVCQDALESFRCSCPKGYTGNRCQMLVDW
CRRSSPCQNGGRCRQKDASFSCECLGGWSGRYCDIPGVSCEVAALKRGLQTDELCHHGGH
CVNTGNTHYCKCPTDYSDSYCESQVDHCEDKHCRNGATCRGYVGGYQCDCMPGYTGENCE
MEVNECQSHPCQNGGTCIDLVGHYICSCPPGTLGVLCEINEDDCAPPLRLRGTPPKCLNN
GTCVDRVGGYRCNCPPGFTGERCEGDINECHSNPCSPTNSLDCIQLPNDYQCVCKPGFTG
RRCQSRFSVCESQPCQNGGACSVSSTSALGYACTCQLGYAGNNCERSMSCRELSCYNGGS
CALTTRGARCTCLTGYAGPQCQHRSNEGCSSQPCRNGGLCTEETSFPFFLCQCAQGWTGK
RCEQGSTRLVETLLPPACPLADCHGKANDGVCDKECNTFPCRWDGGDCSLAVNPWARCTD
PRCWRVFNNSQCDESCNNADCLYDNFDCKNKEKICNPIYEAYCIDHYADGRCDQGCNSEE
CGWDGLDCAGKVPENLADGVLVLVVLLPPDELVNTAPAFLQKLSAILRTTLRFRLDHNGE
PMIRPYTRREARLKRELQPHQEVIGSIVYLEIDNRLCSQRSDDCFPSADSAADYLGALSA
VEMLRFPYPIKEVRGEKIPDPVDMPEWGKLMLVGVAALFLLVILVVGVLIGRRKREHSTL
WFPEGFFPKKEPSSNKNRREPLGQDALGMKYMPKTVEESLLGDHSDSWIDTDCPEAKRLK
VEEPSILSDSEDTVDCRQWTQHHLAAADIRMPPSMALTPPQGEFDQDCMDVNVRGPDGFT
PLMLASFCGGGLEPELPEEEESEECSANIISDLIYQGATLAAQTDRTGETALHLAARYAR
ADAAKRLLDAGADANAQDNTGRTPLHAAVAADAQGVFQILIRTRATDLDSRMYDGSTALI
LAARLAVEGMVEELITCHADINAVDELGKSALHWAAAVNNVEATMALLKNGANKDMQDLK
EETPLFLAAREGSCEAVKVLLAHFANREITDHMDRLPRDIAQERMHHDIVQLLDEYNTVR
SPQGHGGAPHHLAGGHTLSPLMCPPSAFMPGLKNTPQGKKSRRPGAKGSGLGGQHAQNLK
DSAKARNKKLTLDMQSALLESSVTLSPVDSLDSPRGGANNAGYITNPCSPVAMPSSGLFH
SSMSVPSTPMVHNSMMDGSGPFAVSLAQLNDLGDGGMSMQGRVSMASQVNQGPHSYVLNA
GQLGLNMGLVSPVSVPFDWHSRMPSSSQCGGQVVNLVHSSQAGMHPQSPMQQQQNSLMMQ
QHQQNLYRSAQQAMLQPTPVIASTPISHSPVKLPSISEQQQQLHNHSMASQQSLRMGTSS
PSTPQTTQPPPAFFQQQQPPQPQPATQPTSPQASQAPPPQASGSTAGLEDYPTPPSQHSY
SSALDATPKHYLRLSSEHPYLTPSPESPEPWSSPSPHCVSDWSDSTPSPAVAGPAQTQIP
HVQESNGKMQVFA
NT seq
7422 nt
NT seq
+upstream
nt +downstream
nt
atgggggggaattataacgtttggatatttttaccaattttattcttggtccataattgc
gaaggattccgctgcttggataaatacagaccgtgtgacaatggaggaacgtgcatagac
tcaccctcgcgatgcatatgtcggccggggtacatcggccctctgtgccaaagcctggac
ccctgtcaccggtcgccatgcctcaacggagctgcctgcaagagccaggtggccaacgga
atgccacaattcacctgtgtgtgtcagagagggttcagaggtcaagactgctccctcata
gacgcctgtgccaccagcccctgtgccaatggcgcccgctgtgccagttggaataaccac
tataactgttcctgcccgcccgggttccaggggaagaactgccgcaacgatatcgacgag
tgccgcaagtctggcgcctgtctcaacgcaggcctctgcatgaacacccatggttccttc
cgctgccagtgcccacctgggtacagcgggcgcacctgcgaagtgtcctccctgccctgc
gccccctcccagtgcatcaacgggggcacctgccgcccgaccggagatcacacctatgac
tgtgcctgcctgccagggtttgagggacacaactgtgagacaaacgtggatgactgccca
gggcataggtgtatgaatggaggcctgtgtgtggatggagtcaacacctataattgccag
tgctcacctgagtggacaggtcagtactgtgcagaggatgtcaatgagtgccttatgcag
cccaacgcctgccataacggaggcacctgcttcaacaccatcggggggcacacctgcgtg
tgcgtcaacggctggacgggagacgactgcagcgagaacatcgacgactgtgccaccgcc
gtgtgcttcaacggcgccacctgccacgaccgcgtggcgtccttcttctgcgaatgcccc
gtggggaaaaccggtctgctgtgtcacctggacgacgcgtgcgtcagcaacccgtgtaat
gagggcgccgtgtgtgacaccaaccccctgaacgggcgcgccatctgcacctgtcccgcc
ggcttcgtgggcggagcctgcaaccaggacatggacgagtgttccattggtgccaacccc
tgtgaacactttgggaagtgtgtgaacacggaggggtccttccagtgccagtgtggccga
ggctacgccggcccccgctgtgagatcgacatcaacgagtgtctgtccatgccctgccag
aatgatgccacctgtctggaccgcatcggagagtttacctgcatctgcatgccaggctac
atggggacctactgtgaggtggatgtggatgagtgtgagagcaacccttgtgtgaacgac
ggtatctgccgggacatggtcaacggcttcacgtgcacctgccaaccagggtttactggc
accatgtgtcagatcgacattgatgagtgtgccagcacgccctgccagaacggagccaag
tgttacgaccggcccaacggatacgagtgccgctgtgctgaagggtacgagggcacactg
tgcgagagcaacaccaacaactgccagcccgacccgtgccaccacggcacctgcgtggac
ggcatcgccagctacacgtgtaactgcgatgcgggctacacgggttaccgctgtgagaac
cagctgaacgagtgccacagtaacccctgccagaatgggggcaagtgtgtggacctggtc
aacaagtacatctgccagtgtcagcacggtacctcaggtaccaactgtgagattaacttt
gatgactgcgccagcaaaccatgtgactatggcatctgcaaggacggcatcaaccgctac
gactgcgtgtgcaaaccgggcttcaccggccctctgtgcaacgtggagatggacgagtgc
tcgtccggaccctgcaggaacggggggacgtgtgtggacgaggagaacggcttccactgc
cagtgtcccgagggcttccagcctccctactgttactcccaggtggacgagtgtggcagc
aacccctgtgtgcacggcgcctgcagagacgacatcaacggctaccgctgtgactgtgag
cccggctgggtggggaagaactgtgacctagaccgtaatgactgtctgcccagcccctgt
cagaacgctggcacctgcatcgatcagctgaacggattcacctgcaagtgtcgccagggc
ttcagaggtaacctgtgccaggtcaacatcaacgagtgttcgtccagtccgtgtctgaac
cagggcacgtgtgtggacggcgtggccagtttcacctgtctgtgtgagctgccctacagc
gggcccacctgtgccgacgtgctcaccccctgctcccccaacccctgcgccaaccatgcc
ctgtgcaccaacacacctgactacctgggctaccagtgcaactgccagcaaggatggcaa
ggtcagctgtgcaacattgacgtgaacgagtgcatcgccaacccgtgtaagaaccgtggt
acctgcaccaacacactgggagggttcatgtgctcctgccgcggcggcttcaccgggccc
aactgtgagacggacatcaatgactgtgcccctaacccgtgtctgagtgggggttcctgt
acggacggtgtgaactcgttccactgcagctgtctgccaggcttcacggggcctcgctgt
gccgtggaggtcaacgagtgtcagagcgccccctgtaagaacggaggcacctgcacagac
tacgtcaacagctacacctgcacctgcagacctggcttcactggcattaactgtgagacc
aacatcccagactgcactgaaagctcatgcttcaacggaggtacctgtacagacaagatc
aacggctactcctgtacctgtcgctcaggcttcacaggctcccactgccagtatgaggtg
aatgagtgtgactcccagccctgcctcaacggaggggtctgccaggacgctctggagtcc
ttccgctgttcctgtcccaagggatacacaggcaaccgctgccagatgctagtggactgg
tgcagacgctcgtctccctgtcagaacggagggcgctgtcgtcagaaggacgcctccttc
tcctgtgagtgtctgggaggctggtctggacgctactgtgacatccctggggtttcctgt
gaggttgccgcactcaagagaggcctccagacagacgagctgtgtcatcacggaggtcac
tgtgtcaacacaggcaacacccactactgtaagtgtcccacagactactcagacagctac
tgtgagagccaggtggaccactgtgaggacaaacactgtcgcaacggcgccacctgcagg
ggctacgtgggaggataccagtgtgactgtatgccaggctacaccggagagaactgtgag
atggaggtcaacgagtgccagtctcacccatgccagaatggtggcacttgcattgacctg
gtgggacactacatctgttcctgcccacctggcaccttgggtgttctgtgtgagatcaac
gaggatgactgtgctcctcctctgcggctgcgcgggactcctcctaagtgtctgaacaac
ggtacctgtgtggacagagtggggggctaccgctgtaactgtccccctggctttactgga
gagaggtgtgagggggacatcaacgagtgtcactccaacccctgcagccccaccaacagt
ctggactgcatccagctccccaacgactaccagtgtgtctgcaagcccggcttcacaggt
cggcggtgccagagcaggttcagtgtgtgtgagtctcagccctgtcagaacggaggggcc
tgttctgtctccagcacctcagcccttggatacgcctgtacctgtcagctgggctatgct
gggaacaactgtgagaggagcatgtcgtgtcgggagttgtcttgctataatggaggtagt
tgtgctctgaccacgcggggcgcccgctgtacctgcctgacaggctatgctgggccccag
tgccagcaccgtagtaacgagggctgctcctcccagccgtgccgcaacggaggcctctgc
actgaggagaccagcttccccttcttcctctgccagtgtgcccaaggctggacgggcaag
cgctgcgagcagggcagcaccaggctggtagagacccttctgccgcccgcctgccccctg
gccgactgccacggcaaggccaacgacggtgtctgcgacaaggagtgcaacacattccca
tgccgctgggatgggggcgactgctcactggcggtgaacccgtgggcgcgctgcaccgat
ccgcgctgctggcgtgttttcaacaacagccagtgtgacgagtcgtgcaacaacgcagac
tgcctctacgacaactttgactgcaagaacaaggagaaaatctgcaatcccatctacgag
gcgtactgcatcgaccactacgctgacggccgctgtgaccagggctgtaactcagaggag
tgtggctgggacgggctggactgtgcagggaaggttccagagaacctggctgacggggtg
ctggtcctggtggtcctgctacccccggacgaactcgtgaatacggcccctgccttcctg
cagaagctcagcgccatcctgagaaccaccctgcgcttccgcctggaccacaacggagag
cccatgatccgaccctacactcgccgagaggcgcgcctcaaacgagagctgcagccccac
caggaggtcattgggtccatagtgtacctggagatagacaaccgtctgtgttcccagcgg
tcggacgactgtttcccatcggcagacagtgcagcagactacctgggagctctgtcagcc
gtggagatgctccgcttcccctaccccatcaaagaagtccgcggtgagaagatcccagac
cctgtagacatgccagagtggggcaagctgatgctggtgggcgtggcagccctgttccta
ttggtcatcctggtggtgggcgtgctgatcggccgcagaaagagagaacacagcaccctg
tggttccccgagggcttcttccccaagaaggaacccagcagcaacaagaaccgcagggaa
cccttaggccaggacgcactgggcatgaaatacatgcccaagacggtggaggagtctctg
cttggcgaccacagtgactcgtggatcgacacagactgccccgaggccaagagactgaag
gttgaggagcccagcatcctgtcagacagtgaagacactgtagactgtagacagtggacc
cagcaccacctagcggctgcagacatccgcatgcccccctccatggccctcaccccgccc
cagggagagttcgaccaggactgcatggacgtcaacgtccgaggacctgacggtttcacc
cctctgatgctggcgtcgttctgcggaggcggtctggagcccgagctccccgaggaggag
gagtcagaggagtgttctgccaacatcatctctgacctcatctaccagggcgccacattg
gccgcccagacggaccgcaccggagagaccgcccttcacctggctgcccgctacgcccgc
gctgacgccgccaagcggctgttggacgccggggccgacgccaacgcgcaggacaacaca
gggcgcacgccgctacacgccgccgtggccgccgacgcccagggggtcttccagattctg
atccgaacccgggctacagacctggactctcgtatgtacgacggctccaccgccctgatc
ctggctgcccgcctggccgtagagggcatggtggaggaactcatcacctgccacgcagac
atcaacgctgtcgacgaactgggtaaatctgctctgcactgggcagctgctgtcaacaac
gtggaggccaccatggccctgctgaagaacggagccaacaaagacatgcaggacctcaag
gaggagacgcctctcttcctggcggcgcgtgagggtagttgtgaggcggtcaaggtcctc
ctggcccacttcgccaacagggagataaccgaccatatggaccgtctgcctcgggacatc
gcccaggagagaatgcaccatgacatcgttcagctgctggatgagtacaacacagtgagg
agcccccagggccacggaggggccccacaccacctggccgggggacacaccctgtccccc
ctcatgtgcccccccagtgccttcatgcccggcctgaagaacaccccccaggggaagaag
agtcgccgccccggggcaaagggttcaggtctgggagggcagcatgcccagaacctgaag
gattcagctaaggcccgcaacaagaagctgaccctggacatgcagagcgccctgctggag
agctctgtcaccctgtcccccgttgactccctggactccccccgcggaggggccaacaac
gccggctacatcaccaacccctgctccccggtcgccatgccctcctcggggctcttccac
tcctccatgtcggtgcccagcactcccatggtgcacaacagcatgatggacggctctggc
cccttcgctgtgtctctggcccagctcaacgacctgggagatggaggcatgtccatgcag
ggccgcgtgtccatggccagccaggtcaaccagggcccccacagctatgtgctcaacgcc
ggtcagctggggctcaacatgggcctggtgagccctgtcagcgtgcccttcgactggcac
agccgcatgccctcctcctcccagtgcgggggacaggtggtgaacctggtccacagcagc
caggcgggcatgcaccctcagagccccatgcagcagcagcagaacagcctcatgatgcag
cagcaccagcagaacctgtaccgcagcgcccagcaggccatgctgcagcccacgcctgtc
atcgccagcacgcccatctcccacagccccgtcaagctgccctccatctcagagcagcag
cagcagctccacaaccactccatggccagccagcagagcctccgcatgggcacctcctcc
ccatccaccccccagacgacacagccccctccagccttcttccagcagcagcagcctcct
cagccccagccagccactcagcccacctctccacaggcctcccaggcccctcctccccag
gccagtggcagcactgcaggcttagaggactaccccaccccgccctcccagcacagctac
tcctccgccctggatgccacccccaagcattacctccgcctgtccagcgagcatccctac
ctgaccccctccccagagtcgcccgagccctggtccagcccctccccccactgtgtgtct
gattggtcagactccacccccagcccggcggtggccggtcctgcccaaacccagattccc
catgtccaggagtccaacggcaagatgcaggtgtttgcatga
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integrated database retrieval system
