Oncorhynchus mykiss (rainbow trout): 110486409
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Entry
110486409 CDS
T07259
Name
(RefSeq) DENN domain-containing protein 4B isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110486409
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110486409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
ARM_UBP24_USP9X-Y
SPA
Motif
Other DBs
NCBI-GeneID:
110486409
NCBI-ProteinID:
XP_021413676
Ensembl:
ENSOMYG00000000930
LinkDB
All DBs
Position
2:complement(29995917..30041494)
Genome browser
AA seq
1501 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGLAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSTGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAIAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPINTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLKGYRAFLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYDTFPVLCMDLFDQPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQWQKSGSVGSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNAGANG
CSDPASRKPPVGPRDTSTPSPFPPGGVLVRRDQVCLSTFYKDCAEMADSDPDSSCQPGER
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLTGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVSRVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPETTNLAFPLRK
SWDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPISSTHHSLERTNWNTEEEVESAAKPPCGQEAILGHNGVSEDSSSETSSYSES
SSATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWY
FHRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSG
VPMRNHSWRRHNHPFTLSFLEEVLRWVGMNEIHKGITLFLETIAKQPGTPKIQRSLYREM
LFLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggcttggccccactggacgaagagggccaacagagagggggccgggtggtggagccg
gtcatagacctggcggtaatcgcccggggcttgggggaggaggtgcctgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcaccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagtaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctatagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcggtatcctgaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccatcaacaccaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggtgacaaggtttacggtgctgccatccagttctatgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtcttggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagcgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcacctttgtctaccgatactccatctccggaccccacgtg
ctacccctcgagaagcacatctccagcttcatgcacaacgtcccattcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgctagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgtcctcacctccgtcagcgaggccctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgcgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcaaggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaaacagctggagctggagatccag
gaggccttcctgcgtttcatgagctgcttgctgaagggctaccgtgccttcctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccaactgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagacggttcagagtgccccactcactacagctatgacacgttccctgtg
ctctgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagt
gcccccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacagcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccggat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgcttgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctctaccaatcaaggtggccgtcta
cgctgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccagtcaga
caatggcagaaaagtggttcagtaggctcgcggacagatacaatggacagtaaccaacga
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcttgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacgcaggtgccaatggc
tgcagcgatcccgcctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagatggccgactctgaccctgactccagctgccagcctggggagaga
gatggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactac
aacaatgtgtcaccaccgagtcggggcagcctgacggggaaactgcagcagctgctcacg
cctactcgccatcgagtctcggggcggcgggccgccagtgtagacgcccggcgctcgggg
ggagaaaacgggcctgtgagccgggtgtcagaacagagacagtcccgaaaagcccaggtg
gctgagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctg
tcggtggggagtgacgttgacctccctgaaaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcgggactacaggtgttgatgtcgagctgctccttg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccatcagcagcactcaccacagcctggaacgtaccaac
tggaacacggaggaggaggtggagagcgcagccaagcccccttgtggccaggaggccatc
ctgggtcacaacggtgtgagtgaggattccagttctgagaccagcagttattctgagagc
agcagcgctaccatgggttcatcggtgggcgagtctccccaggtgacggtggcctacctg
agcccattggtgctgcgcaaggagcttgagagcctgctggagaacgagggcgaggcggtg
ctggcacagggccagctcctggacagccactccatcatcttctggaacctagtgtggtac
ttccatcgcctgggcctgcctagcaacctgctgcagctggttcgctcctcaccgctggcc
aaccaactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacaca
ctgacccctgacacagaccactggccccccctctacatcctgtggaggatacacagtggc
gtacccatgcggaaccacagctggcggaggcacaaccaccccttcaccctgtccttcctg
gaggaagtgctgcgctgggtcggcatgaacgagatacacaagggaatcaccctcttcctg
gaaaccattgctaagcaaccgggcacgcccaagatacaaaggagtctgtacagagagatg
ctcttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatac
aaggctgcgtaccaacggctgagtggctccttggggcgcggggagctccgcaggaagcga
gcccaaccacccagccccaaggctgtggactgcagacggagcttcctgctgcccctcgag
tgctga
DBGET
integrated database retrieval system
