Oncorhynchus mykiss (rainbow trout): 110486414
Help
Entry
110486414 CDS
T07259
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110486414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110486414
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
110486414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
CobT
BUD22
Nop14
Motif
Other DBs
NCBI-GeneID:
110486414
NCBI-ProteinID:
XP_021413682
Ensembl:
ENSOMYG00000005503
LinkDB
All DBs
Position
13:complement(42479024..42484604)
Genome browser
AA seq
568 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEIVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAITEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEEEDDDEDEDEEDDYEEEEEDDDVEEEDSSVNQVSSPPSVPRSPDASSFLCFPSPD
KLLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDKDVKSAVLDSIDAILRKAFA
SPSFQGYNFISSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIAVLEAFM
SRHIQALESCSSSRNILKSTLEQVRPEN
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatgctgttgcacagttggccgactctctggccaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atagtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcggctgcgttctgagatccctccagccctg
aactccctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggaccttagt
gacaatgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctc
gcccaggccttccagctgatgggtagtctggaggaagtgcacgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaacgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgtagtgtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcaatcactgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagaagctgcactgctggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggaggatgatgatgaagatgaagatgaggaggatgactatgag
gaggaggaggaggatgatgatgtggaggaagaagacagcagtgtgaatcaggtttcctct
cctccgtcagtgccccgatccccagatgcctcctccttcctctgcttcccctcccccgac
aagctgctcaaactgggcaccaagagggccctgctctttgaacagcaggtagatgtggcg
gatgctggtaagacagcggaggcattcctgaaaatctcctctgtgtacaatgaggaagat
aaagatgttaagagtgctgtcctagacagtattgatgcaattcttaggaaagccttcgca
agcccctccttccaaggttacaactttatatcatcgctgttagtaatgctgggactcctc
aagagtgaggacaaagtgaagccggtgcgtgtagtacctgggcatttgcaggccctggag
tacgttgtgcgtcaggactacttcccccaggaccacatcgccgtgctggaggccttcatg
tcccgacacatccaggccctggagtcgtgcagcagctccaggaacatcctcaagtccaca
ctggagcaggtcaggcctgaaaactga
DBGET
integrated database retrieval system
