Oncorhynchus mykiss (rainbow trout): 110486429
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Entry
110486429 CDS
T07259
Name
(RefSeq) trinucleotide repeat-containing gene 6B protein
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110486429
03036 Chromosome and associated proteins [BR:
omy03036
]
110486429
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
110486429
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Gene silencing
piRNA pathway
110486429
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
RRM_occluded
RRM_1
Motif
Other DBs
NCBI-GeneID:
110486429
NCBI-ProteinID:
XP_021413703
Ensembl:
ENSOMYG00000010166
UniProt:
A0A8C7PG26
LinkDB
All DBs
Position
13:42700605..42724376
Genome browser
AA seq
1927 aa
AA seq
DB search
MEDKKKKKEDKKKREASQKVTEQKVKVPELTKATSTQSLATPGSVSPSPGPTPPSSPCPA
TGFAVPTGGNNANRAAVANGQPPTGTQRYMPREVPPRFRCQQDHKVLLKRGQPPLSCMLL
GGGSCRGDTPPLSQGDAPSATTSGSTDPNLGSPSPSPPHSSPSSSVAASSTYANSTWGVG
SGSQPPFQGWEKVIVDGSDLEEWPSIVGGDRVGTEGAELDGPNNSSASRTDKCTQQHLRA
GAGSSDSPSPPHSSPSSLTECVLSGVVWGSSSQPGIGVAAAATEGLVLNNSKVSFLPGAQ
ESPLSGIPGANFNPNANPSAWPALVQDGTTGVGAATTEAVPSSITTSFSASTTHTHPLSF
ANQASHQHQLHEMPARDGAHLHGDWGGLGPELGEGPNQGGRVLVDSGVVGGSGNLSASSS
SSTTSSSSWRALPPPSNLNTGASKTDGWDRLSGDAAQGEEANMWGFGSQAEKAGLAGDEA
WVRGSDVSSNTPVVSQGAWDGATEEDWGGTQGSTGVRGSSNPAIGSSGGGESSSSSGGGG
DGGISQDSASPTFATMTTAWDNQKGVGAVGEWAGQGGRGSGGPSCSSGGGSRAGSHNRHQ
EHSRHCSSNPPPNPEVALQSMLSRSDLDPRVLSNTGWGQIQVQQNVAWDLDTGSASQNEG
SSSPAFPSQAVNSTGRSSTYPASNSTMTTEPSAGAHMPTMNTGPGPVPSKGGWDDESNCA
PSSNMQNSASSRMPVEDINGSQGKTSGAWGDVGTSESHGKGWGSEEREGRDRRGGGGSNW
RDFGERGGGRGSGWGSGQEEKGTAGGWKEMGREGGGWEQRGGGNWAQREPKTVSGGWGEG
RGRSGGNTDKGFWGNIDDGGPQRSWGSGGDMGGKPHQDWCMKPHSAQIPNSQDAKLKAPN
QQQHQSQTQQPPGGLGRSGGPPTQNQNQSSGWTADPIPQNPVEPAESPEPSGWEEPSPQS
ISRKMEIDDGTSAWGDPTCYNSKNVNLWDKNNAPSGPPPTLQGQTQQAPPTSVQQPPPRR
QPAIPANRDSNPGNAPGMGPGMWGGGGNLVGQSVDNGTASWGQTSAAPSGWGDPDNSSKA
AGWGNPSSNSGSKSVQESWGKGEGPVPASRHSSWDEEEDVGGVWNSTGSQTSSNYNSGGW
GQGPGGKRGNSKGGGGDNWMNPMTRQFQNMGLMGEDLSLDKKLEGDKRGMNDYSGEMRRG
GRGGGGYRMPSSKDMGPGDMGPYSDKMGGHGLFGGSGGMPPSRGMHQPGMHPMNPSQGLR
GQVPHQFLSAQVPGPMLKQIPSPGSSVGGVGVGGGVFPPQLSPQQLAVLSNIYPHVQQFH
LACQLLLQQQQQQQLLQNQRKLPQPIRQQPDPQQLARIMAILQQQRQQQQEVVGGGSGSS
KLSPSLGGAPKQPMADSMPHPGMGGPLSDLHAKTQGMYSGLAPGGNLSGLELGSMVGGVK
DGGQQSRFKWMMEGHSPAPSPPDTAHHKNGPLPMAMKVREGSPYSQYELLGVDDLGMPPQ
GPSDNWHRTPGSKMGMAGTSSWPPEFQPGVPWKGIQSADPESDPYMTPGSVLGSHGPSSL
SDSDHQLLRDNTGPNPSLNTLLPSPGAWPYSASDSPLGNAHSTAKYSEYKPSWPPEPIGH
NKPWKTSHVSSQLPRPPPGLTSQKQASTSPWSSGAPRLARGWGEGGGSQDSRFGTGSAWS
DGVASRGSCWLLLSNLTPQIDGSTLRTICMQHGPLLTFHLGLTQGSALIRYSTRQEAAKA
QGALHMCVLGNTTILAEFVSEEEVARYFAHSQVGGAEGASPVAGAAQGSSGTRTAVGNRG
GSPGSERAAIGAGNNLGGNSGGGVVLGSVGPSGWQSLDGTGSSPEATSAQGPGLGIFAQW
SANGAGKGVGGGVGRVEGGRSGLWGGVTPGYSSSSLWGAPQMEDRHQMGSPAALLPGDLL
GGGADSI
NT seq
5784 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaagaaaaagaagaaagaggataaaaagaaaagggaagcttcccagaaggtg
actgaacaaaaggtcaaagtgccagaattaaccaaggccacctccacgcagtcactagcc
actcctggctctgtgtctcccagccctggccccactccaccatcgtccccctgccctgca
actgggttcgctgttcctacgggcgggaacaatgcaaaccgggcggctgtggccaacgga
cagccccccaccggaactcagcgctatatgcccagagaggtgcccccacgattccgctgt
cagcaggaccacaaagtgcttctgaagaggggccagccaccactgtcctgcatgctgctg
gggggaggcagctgtaggggagacacaccccctctttcacagggagatgcccccagtgca
accacatctggatccacagatcccaatctgggttcaccttctccttcacccccccactct
tcaccctcatcttcagtcgctgcttcttcaacttatgcaaattccacatggggggtgggc
tctggcagccagcccccttttcagggctgggagaaggtgatcgtggatgggagtgacctt
gaagagtggcccagcatcgtgggtggggatagagtgggtactgagggagcagagctggat
ggccccaacaacagcagtgcctcacggactgacaaatgcacccaacagcatctgagggca
ggagctgggagttcagatagtccctccccaccccactcttccccttcgtcactcactgaa
tgtgtcctgtctggtgtcgtgtggggctcttccagtcagcctggaattggagtggcagct
gcagcaacagaggggctagtgctcaacaattccaaagtctcttttcttcctggggctcag
gagagccctctcagtggaattcctggtgccaacttcaaccctaatgccaacccttcagcc
tggcctgcccttgtgcaggatggaacgacaggggttggtgcagctaccactgaagctgtg
ccctcatccatcacaacatccttctctgccagtaccacccatactcatccactctccttt
gcgaatcaagctagccatcagcaccaactccatgaaatgcctgccagggatggagcacat
ctccatggggactgggggggcttggggccggagcttggagaaggaccaaatcaaggaggc
agagtacttgtggacagtggggttgttggagggagcgggaatctctctgcttcgtcatcc
tcctccacaacctcttcctcttcatggcgagccttgcctcccccctctaacctcaacaca
ggtgcctctaagactgacgggtgggacagattaagtggagatgcagctcagggggaggag
gccaacatgtggggctttggcagccaagctgagaaagctgggttggcaggagatgaggca
tgggtcaggggaagtgatgttagctcaaataccccagtggtatctcagggagcatgggat
ggggctacagaggaggattggggcggtacacaggggtcgacaggtgtcaggggttccagc
aacccagcaataggaagtagcggtggaggcgagagcagcagcagcagtggaggtggtggt
gatggcggcatatcccaggattctgcctcaccaacatttgctactatgacaacagcttgg
gacaatcagaaaggggttggtgctgtgggggaatgggcaggtcaaggtggcagaggaagt
ggaggcccctcatgctctagtggaggagggtccagggctgggagtcacaatcggcaccag
gagcattcccgccactgctccagcaacccaccccccaaccctgaagtggccttacagagc
atgctcagccggtcggacctggatcctagggtgctgtccaacaccggatgggggcagatc
caggtacagcagaatgtggcctgggacctggatacaggatcagccagtcaaaatgaggga
agcagttcccctgcatttccatctcaagccgttaattctactggtcgatcttctacttac
cccgcaagcaacagcacaatgactactgaaccatctgctggggcccacatgcctactatg
aacactggtcctggccctgtaccttcaaagggtggctgggatgacgagtcaaattgtgct
ccatcatccaacatgcagaattctgcttcctccaggatgccagtggaagatattaatggc
agccagggaaagacaagtggagcctggggcgacgttggtacttcagagagccatggcaaa
ggctggggcagtgaggagcgggaggggagagaccgcagagggggcggaggaagtaactgg
agagatttcggagaacggggtggtggaagagggagtggctggggaagtggtcaggaggag
aaggggactgcagggggttggaaagagatgggtagggagggaggtggatgggaacaaaga
gggggaggcaactgggcgcagcgtgaacccaagacagtcagtgggggatggggggaaggt
aggggcagaagtggaggcaacacagacaagggattttggggtaacatcgatgacggaggc
ccacagaggagttggggaagtggaggtgacatgggcggcaaaccgcaccaggactggtgc
atgaagccacattcagcacagataccaaacagccaagatgcaaaactgaaagccccaaat
caacagcaacaccaatcgcagacccaacagccaccaggaggcttgggcaggtcaggaggt
cctcccacccagaatcagaaccaaagctcgggctggactgctgaccccatccctcagaac
cctgttgagcctgctgagtcccctgaaccaagcgggtgggaggagccctcccctcagtcc
atcagccgcaagatggagattgatgatggcacttcagcttggggagatcccacctgctac
aacagcaagaatgtgaacctgtgggacaaaaataatgccccctctggtcctccaccgaca
cttcaaggccaaactcaacaggctccccctacatctgtacaacagccaccaccaaggaga
cagcctgcgatcccagctaaccgtgactcaaaccctggcaatgcacctggaatgggccca
ggtatgtggggagggggtggcaaccttgttggacaatctgtggataatggcactgcttcc
tggggtcaaacttctgctgcaccatctggctggggagacccagataactcaagcaaagct
gctggttggggaaacccctcatccaactcaggctcaaagtcagtgcaagagagctggggc
aaaggagagggcccagttccagcctctcgacactccagttgggatgaggaggaggacgtt
ggtggagtttggaacagcacaggctcacagaccagcagcaactacaactctggtggctgg
gggcaaggccctgggggaaagagagggaacagcaagggtggaggtggagacaattggatg
aacccaatgacacgacaattccaaaatatgggactcatgggcgaagacttgagtcttgat
aaaaagttggaaggagataagagagggatgaacgactacagcggtgaaatgcggagagga
ggaagaggtggcggaggctaccgtatgcccagttccaaagacatggggcctggagacatg
gggccttacagtgacaagatgggtggtcatggtttatttggtggcagcggtgggatgcct
ccgtctcggggaatgcaccagcctgggatgcatcccatgaacccctcccaagggttacgc
ggacaagtccctcatcaattcttgtctgcgcaggtgccgggcccgatgctaaagcagata
ccctctcctggcagcagtgttggaggagttggtgtcggaggaggggtgttcccacctcag
ctctccccacagcaacttgccgtgcttagtaacatttacccccatgtgcagcagttccac
ctggcttgtcagcttcttctgcagcagcaacagcagcagcagctcctgcagaaccagagg
aagttgccccagcctatacgccagcagcctgatccacagcagctggctagaatcatggct
attctgcaacaacagagacagcaacaacaggaagtggtgggcggaggcagtgggagctcc
aaactgtccccatctcttggaggggcaccaaaacagccgatggcagactcgatgccccac
cctggtatgggtggccccttgtcagatcttcatgccaaaactcaggggatgtactctggg
cttgctcccggaggcaacctgtctgggctggagctgggctccatggtggggggggtgaag
gatggagggcagcagtcccgcttcaaatggatgatggaaggtcactctccggccccttct
cccccagatacagcccatcacaagaatggtcctttacccatggccatgaaagttcgagag
ggctccccatattcacagtatgagttgctcggggttgatgatttgggaatgccccctcag
ggcccttctgacaactggcaccgtacccctggaagcaagatgggcatggctgggacatcc
agctggcccccagagttccagcctggagtgccctggaaaggcatccagagtgccgacccg
gagtctgacccttacatgacccctggcagtgttctgggctcccatggaccctccagcctc
agtgactctgaccaccagttactgcgagacaacacagggccaaacccctccctcaacacc
ttgctgccttcaccaggtgcctggccctacagtgcctcagacagcccccttggcaatgca
cacagcacagcaaagtactcggagtacaaacccagctggcccccagagcccatcggacac
aataagccgtggaagaccagtcacgtcagttcccagctgccacgcccccctcctggactg
accagtcagaaacaggcctcgacttccccatggagcagcggagccccgcgtttggccagg
ggctggggagagggcgggggcagtcaggattcaagatttgggacaggctcagcgtggagt
gatggtgtggcctccagaggcagctgctggctactgctcagcaacctcacccctcagatc
gatggttccacactacggactatctgtatgcagcatggccccctgctgacctttcacctc
ggcctgacccagggcagcgccctgattcgctacagcacacgtcaggaagcagccaaggct
cagggtgcactgcacatgtgtgttctgggaaacaccacaatcctagcggaatttgtgagt
gaggaggaagtggctcgctattttgcacattcccaggttggaggagcggagggggccagc
ccagtggcaggggcagcccagggctcgtcaggaacgcgcacagcggtgggcaacagaggg
ggctccccggggagtgaacgagcagcaataggagcaggaaacaatttgggtgggaacagc
gggggaggagtggttctgggtagtgtggggccttccggctggcagagtttggatggaact
ggcagctctccagaggccacctcagcccaaggtcctgggcttggtatttttgctcagtgg
agtgccaacggggctgggaaaggggtagggggtggggtgggacgggtagagggagggagg
tctgggctctggggtggtgtgactccaggttactccagcagcagcttgtggggtgcaccc
caaatggaggacaggcaccaaatgggcagcccagctgccctgttgcctggtgacctgctg
ggaggaggggctgactccatctga
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integrated database retrieval system
