Oncorhynchus mykiss (rainbow trout): 110486435
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Entry
110486435 CDS
T07259
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110486435
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110486435
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110486435
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
110486435
NCBI-ProteinID:
XP_021413713
Ensembl:
ENSOMYG00000010586
LinkDB
All DBs
Position
13:42762420..42781242
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AA seq
637 aa
AA seq
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MRGGSSYGDRDRDRGRDRGSPRFGSSRGPPPNKKFGNPGERLRKKKWDLNELPKFEKNFY
NEHPDVQRMSQYDLEEFRRKKEITIRGSGCPKPVSSFSQAHFPQYVMDVLMQQNFKEPTA
IQAQGFPLALSGRDMVGIAQTGSGKTLSYLLPAIVHINHQPYLERGDGPICLVLAPTREL
AQQVQQVAHEYGKSSRIKSTCVYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNL
RRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLKDYVQ
INVGALELSANHNILQIVDVCTESEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDDLTR
RMRRDGWPAMCIHGDKTQPERDWVLTEFRSGKAPILIATDVASRGLDVEDVKFVINYDYP
NSSEDYIHRIGRTARSTNKGTAYTFFTPGNLRQARELIRVLEEARQAINPKLLQLVNTGR
GGGGRSRFRGNGSNASNPNLMYQDECNRRMRTVSSKDSRGSSSGTGSSSSFSRDSRDGGS
SRAGDRSSSSYRDRRDSRSYGSSSSYSQYKSGSSNGGQDQSAGQFGSVSRSSKPPPPSSG
PQPLMAQKFTPAKPMMGLMGHSPFQFASPPPPTSQRK
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggttcatcgtatggagatcgagacagggaccgtggtcgcgacagggggagt
cctcgttttgggtctagcagaggtccccctcccaacaagaagtttgggaacccaggggag
cgtttgcgcaagaagaaatgggacctaaacgagcttccaaagtttgagaagaacttttac
aatgaacatccagatgtccagcgcatgagccagtatgacttggaggagtttcgcaggaag
aaggagatcactatcagggggtcaggctgcccgaagcctgtcagtagcttctcccaggcc
cattttccccagtatgtgatggatgtgctgatgcagcagaactttaaggagcccacagct
atccaggcacaaggcttccctctggccctgagtggcagggacatggtgggcatcgcacag
acaggttctgggaaaaccttatcgtatctcctgcctgccattgtgcacattaaccaccag
ccctacctagaaagaggagacggaccaatctgtttggttctggcaccaactcgagagctg
gcccagcaggttcagcaagtggcgcatgaatacggcaagtcgtcacgcatcaagagcacc
tgtgtctatgggggagctcccaagggaccccagatccgtgacctggagagaggtgttgag
atctgcatcgccaccccgggtcgtctcattgacttcctggaggcagggaagaccaaccta
cggcgctgcacctacttggtgctggacgaggctgacaggatgctggacatgggctttgag
cctcagatccgcaagattgttgaccagattaggcctgacagacagaccctgatgtggagt
gccacctggcccaaggacgtgcggcagctagcagaggacttcctgaaggactatgtccag
atcaacgtgggagccctggagctgagcgccaaccacaacatcctgcagattgtggatgtg
tgcacggagagtgagaaggacaacaagctgctccagctgatggaggagatcatggctgag
aaggagaacaagaccatcatctttgtggagaccaagaaacgctgcgatgatctgacccgc
agaatgagacgtgatgggtggccagcgatgtgtatccatggtgacaagactcagccagag
agagactgggtgctgacagagttccgtagtggcaaggctcctattcttattgctactgat
gtggcctcacgtggtttggatgtggaggatgtcaaatttgtcatcaattatgactaccca
aactcctctgaggactacatccaccgtatcggccgtacggcccgtagcaccaacaagggt
acagcctacacattcttcactccgggcaaccttcgtcaggcccgtgagctcatccgtgtt
ctagaggaggcccggcaggccataaaccccaagctgctgcaactggtcaacactggccgt
ggaggaggaggcaggtcacgtttccgtggcaacggctccaacgccagcaaccccaacctg
atgtatcaggatgagtgcaaccggcgcatgcgcaccgtaagcagcaaggacagccggggg
agcagcagcggcacggggagcagcagcagcttcagccgcgacagccgagatggagggagc
agccgcgccggggacaggtcgtcctcttcctacagggacaggagagacagccgcagctat
ggctccagctcctcctacagccagtacaagtccgggagcagcaatggggggcaagatcag
tcagcggggcagtttggttcagtcagcaggtccagtaagccccctccaccctcctcaggg
ccgcagcccctcatggcccagaagtttaccccagccaagcccatgatgggattaatgggg
cactcgcccttccagtttgcttccccaccccctccaacctcacaaaggaagtaa
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