KEGG   Oncorhynchus mykiss (rainbow trout): 110486438
Entry
110486438         CDS       T07259                                 
Name
(RefSeq) transcription factor Sox-10
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110486438
Transcription factors [BR:omy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110486438
SSDB
Motif
Pfam: Sox_N HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 110486438
NCBI-ProteinID: XP_021413717
Ensembl: ENSOMYG00000012972
UniProt: A0A8C7PTJ4
LinkDB
Position
13:complement(42801570..42809120)
AA seq 496 aa
MSGEEQSLSELEMSPGVSDDGHSLSPGHSSSAAGGGDSPLSGPQPQLTGIGDDALSDVAG
GISIKSDEDDDRFPIGIREAVSQVLNGYDWTLVPMPVRVNSGSKSKPHVKRPMNAFMVWA
QAARRKLADQYPHLHNAELSKTLGKLWRLLNESDKKPFIEEAERLRKQHKKDYPEYKYQP
RRRKNGKPGSGSEADGHSEGEVSHSQSHYKSLHLDVAAHVRGAGSPLADGHHPHTAGQSH
SPPTPPTTPKTELQSGKSGDGKREGGGAGGSRGGMGVGAEGGSGSGSGKPHIDFGNVDIG
EISHEVMANMEPFDVNEFDQYLPPNGHPGIGQSAGSAAAAGSSASPYAYGISSALAAASG
HSAAWLSKQHQQHHASPLGSDPSKAQIKSEAGSGGHFAEASSGGSHVTYTPLSLPHYSSA
FPSLASRAQFAEYADHQASGSYYAHSSQASGLYSAFSYMGPSQRPLYTAITDPSSVPQSH
SPTHWEQPVYTTLSRP
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtcgggagaggagcagagtttatctgagttagaaatgagtccgggggtctcagacgac
ggtcactccttgtcaccgggtcactcatccagtgccgcaggcggaggagactcacccctg
tccggtccgcagccccagctaacagggatcggcgacgacgccctatccgatgtagctggc
gggatttccatcaagtccgatgaagacgacgatcgcttccccattggtatccgcgaggca
gtgagccaggtgctgaacggctacgactggacactcgtgcctatgcctgtgcgcgtaaac
tccggcagcaaaagcaagccgcacgtgaaaaggcctatgaacgccttcatggtgtgggca
caagcagcacggagaaaactggcagaccagtatccccacctccacaacgcggagctcagc
aaaaccctcgggaaactatggaggctcttgaatgagagtgataagaagcctttcatcgag
gaggcggagaggctgaggaagcagcacaagaaggactacccggagtacaagtaccagcca
cgccgccgcaagaatggcaaacccggctccggctctgaagctgacggccactctgagggt
gaggtcagccacagccaatcgcactacaagagcctccacctggacgtggcggcccacgtc
aggggggcggggtctcctctggctgatggacaccacccacatactgcaggccagagccac
agccctcctacaccacccaccacccccaagacggagctccagtctgggaagtcgggtgat
gggaagcgggagggcggtggagcagggggctcccgtgggggaatgggggtaggagcagag
ggtggctctggatcagggtcaggcaaaccacacattgatttcggcaacgtggacatcggt
gagatcagccacgaggtgatggccaacatggagccctttgatgtgaacgagtttgaccag
tacctgccccccaatggtcacccagggattggacagagtgctgggtcagcggcagcagca
gggtcctctgcctctccctatgcctacggtatctcctctgccctggccgcggccagtgga
cactctgcagcgtggctatccaagcagcaccagcagcatcatgcctcacctctgggctcc
gacccctccaaggctcagattaagagtgaggccggctcggggggacactttgccgaagca
tcctcagggggttcccatgtcacctacactcccctcagcctgccccactacagctctgct
ttcccctcactggcctccagggcccagtttgcagagtatgctgaccaccaggcctcggga
tcctactacgcccactccagccaggcctcagggctgtactcggccttctcctacatgggg
ccctcgcagaggcccctgtacacagccatcactgacccgtccagcgtgccacagtcacac
agccccacgcactgggagcagccggtctacaccaccctgtcgcggccctga

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