Oncorhynchus mykiss (rainbow trout): 110486546
Help
Entry
110486546 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04340
Hedgehog signaling pathway
omy04350
TGF-beta signaling pathway
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110486546
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110486546
04350 TGF-beta signaling pathway
110486546
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110486546
04137 Mitophagy - animal
110486546
09144 Cellular community - eukaryotes
04520 Adherens junction
110486546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110486546
04121 Ubiquitin system [BR:
omy04121
]
110486546
03029 Mitochondrial biogenesis [BR:
omy03029
]
110486546
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110486546
Membrane trafficking [BR:
omy04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110486546
Autophagy
Mitophagy
Other mitophagy associated proteins
110486546
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110486546
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
110486546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
110486546
NCBI-ProteinID:
XP_021413912
Ensembl:
ENSOMYG00000026065
UniProt:
A0A8C7S0X4
LinkDB
All DBs
Position
13:45559934..45614619
Genome browser
AA seq
772 aa
AA seq
DB search
MSNQGVRRNGPVKLRLTVLCAKNLVKKDFFRLPDPFAKVVVDGSGQCHSTDTVKNTLDPK
WNQHYDLYIGKSDSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GLNDSDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPGRPLSCIVDENTPILSTNGATPTIPCISSSDQRAQERRVRSQ
RHRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEEL
GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHLVLNPSPNGSRSGIEIQNSPI
SRQIQLKEQAQQALVSPGNLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGHCRIE
VSREEIFEESYRQVMKMRPKDLWKRLMVKFKGEEGLDYGGVAREWLYLLSHEMLNPYYGL
FQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQLLGKP
ITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKIIQVTQD
TKKEYVRLYVNWRFLRGIEAQFLALQKGFNEVISQHLLKAFDEKELELIVCGLGKIDIND
WKSNTRLKHCTPDTNIVKWFWKAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPR
LFTIHQIDASSNNLPKAHTCFNRIDIPPYENYDKLYDKLLTAIEETCGFAVE
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaccaaggagttcggcgaaatggtccggttaaactgcgtttaacagtcctctgc
gccaaaaacctggtgaagaaagatttctttcgcctccctgatccctttgccaaagtggtg
gtggacggctcaggacaatgtcactccacagacaccgtgaagaacaccctcgaccccaag
tggaaccagcactacgacctatatattggaaagtctgactccatcaccatcagcgtgtgg
aaccacaagaagatccataagaagcagggggctggcttcctgggctgtgtacgccttcta
tccaatgccatcaaccgcctcaaagacaccggctatcagagattggacatgaacaagctg
ggcctcaatgacagtgacacagtgaggggtcagatagtggtgagcctgcaatccagagac
aggataggcacaggaggcccagtggtggactgcagccgtctgtttgacaatgacctgcca
gacggctgggaggagcggaggactgcgtctggccgaatccagtacttgaaccacatcaca
cgcaccacacagtgggagaggcctaccaggcctgcgtcggagtactccagcccaggccgg
cctctcagctgcatcgtggatgagaacacgcccatcctgagcaccaacggggccacgccc
accattccgtgtatctcgtccagtgaccagcgggcccaggagagacgcgtccgctcccag
agacacaggaactacatgagcaggacacacctccacacacccccagatctgcccgaggga
tacgagcagaggaccacgcagcagggccaggtctacttcctccacacccagacaggagtc
agcacatggcacgaccctcgagtgcccagagacctgagtaatgtaaactgtgaggagctg
ggcccactgccccctggctgggagatcaggaacacagccaccggccgggtctactttgtg
gaccataacaaccgcaccacgcagttcacagacccgcgcctctccgccaacctgcatcta
gtccttaacccaagccccaatggttcccgcagcggcatcgaaattcagaacagtccgatc
agccgtcagatccagctgaaggagcaggcccagcaggcactagtgtctccaggtaatctg
ccagaggaggccgagtgcctcacggtgcccaagtacaagagggacctggtgcagaagctg
aagatcctccgccaggagctgtcccagcagcagccccaggcaggccactgtcgcatagag
gtttcccgcgaggagatctttgaggagtcttaccgccaggtgatgaagatgaggccgaag
gacctgtggaagagactgatggtgaagtttaaaggggaggaggggctggactacggagga
gtggccagggagtggctgtatctgctgtcccatgagatgctgaatccgtactacggcctg
ttccagtactcccgcgatgacatctacaccctgcagattaaccccgactcggccgtcaac
ccggagcacctgtcctacttccactttgtgggtcgtatcatgggcatggcggtgttccac
ggccactacatagacgggggcttcaccctgcccttctacaaacagctgctggggaaaccc
atcacactggacgacatggagtcagtggacccagacctccacaacagcctggtctggatc
ctggacaatgacatcacaggcgtgttggaccacaccttctgtgtggagcacaatgcctac
ggggagatcatccagcacgaactcaaacccaacggcaaaatcatccaggtcacccaggac
accaagaaggagtatgtcaggctgtatgtgaactggcgtttcctgcgaggcatcgaggct
cagttcctggccctgcagaagggcttcaacgaggtcatctcacagcacctcctcaaggcc
ttcgacgagaaagagctggagctcatagtgtgtggcctgggtaagatcgacatcaacgac
tggaagtccaacacacggctgaagcactgcacccctgacaccaacatcgtcaagtggttc
tggaaggccgtggagtcatacgatgaggagcgccgggccaggttgctgcagtttgttacc
ggctcctccagggtccccctgcaaggcttcaaagccctccaaggtgctgcaggcccacga
ctcttcaccatccaccagatcgatgccagctccaacaacctgcccaaagcccacacctgc
ttcaaccggatcgacattcctccctacgagaactatgacaagctgtatgacaagctgctc
actgctatcgaggagacgtgtggctttgctgtggagtga
DBGET
integrated database retrieval system
