Oncorhynchus mykiss (rainbow trout): 110486568
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Entry
110486568 CDS
T07259
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110486568 (recql5)
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110486568 (recql5)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
110486568 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
SRI
Motif
Other DBs
NCBI-GeneID:
110486568
NCBI-ProteinID:
XP_021413951
Ensembl:
ENSOMYG00000028772
LinkDB
All DBs
Position
13:complement(46212178..46228955)
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AA seq
1042 aa
AA seq
DB search
MTSIKKALKTHFGFDKFRSQKQEDVVKAVVKGDRDVFVCMPTGAGKSLCYQLPAVLAKGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAGERRLILADLESESPRLKLLYITPEM
VASSAFQPCLTGLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRARLPGIPCVALT
ATAPQKVQEDIAKSLRLRSPLSFATPVFRSNLHYEVVYRELLEDPYKHLHAFIREALTLG
EGPKGQGCGIVYCRTRDGCETVAYQLTKLGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVI
VATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNF
LIRKEVARKQAKRGSEKDQDKASITDFEAMVSFCEQEGCRHATISKFFGDQKPDCAGACD
YCRDPKAVRAQLEKGATLCTKTGAAWSTQPRGPFGFDRDLYAGGRKGYGFERHDEEGWES
GGDDDGSEHRRKEFGDLFKKQMNLRKVSERHKDSFIPPDDNCPLREASSQKIPRLTVKAR
EHCVALLQEALNNHQVAAADTHSSDTLSLAVDIEHEVFKITKSSNLYKAAVLKRVSEMKK
GGAASAGGGREGTSGSGESTEIKTESKEEAASSSSLTEEQQGFTPASQIYSLKRKRIGAG
LRGSSNPFQTASELMRASNCEVSTTGPGANSGTGSGGPDCLAGSGESAGEEERGKRKETN
TGDTAPTISSSIRAKASAVSAFLNSPTKTGGKALSKKQKLAEAAKNSRNITQYFGKKPIE
KSQEVEIRTNDVSSQAFSIPPQSLPTQEITPATVSMDTIPMDTSPMEIIPTETIPIETIP
MDTIPTEINNLDNDEEEVKEEAKLDLDSITVQNAHENKAKSLLKLRLCEEREALPPAKRS
CPLQDSRKKVTFNPKVQETVLEPGSPSKAPKPVSLKEVADIVVRCLDPFYTQGKFATKEL
FKSFARYLSHLLAEGRSRGRGQVKMQARNLIKKFFSSVKRCESEADWKHLKGPHSTETSE
HRGMGGGGTMNRKVEEDNNLGV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattaaaaaggcgttaaaaacccattttgggttcgataagttccgatcccag
aagcaggaggacgttgttaaagcagttgttaaaggtgaccgggatgtttttgtgtgcatg
cccaccggggcagggaagtccctctgctaccagcttcccgcagtgttggctaagggtatt
accttggtcatatcccctcttatcgctctcatccaggaccaagtggaccacctaagggac
ctgaacattcctgcatgctccatcaactccaagctccctgcaggggagcgccgtctgatc
ctggccgatctggagagtgagagccccaggttgaagctgctttacatcaccccagagatg
gtggcctcctctgccttccagccctgccttacaggccttctctcccggagcctcctctcc
tacctggctgtggacgaggctcactgtgtctcccagtgggggcatgacttcagaccagac
tacctcaaactgggcagtctgcgtgcccgtctgcccgggataccctgcgtggcgctgacg
gccacggcaccccagaaggtgcaggaggacatagcaaagtccctgaggctgcgatcaccg
ctgtcctttgccacacctgtgtttcgcagtaacctgcattatgaggtggtgtacagggag
ctactagaggacccttacaagcacctgcatgccttcatcagggaggccctgactctgggg
gaaggccccaaaggacagggttgtggaattgtgtactgtcggaccagagatggctgtgag
acggtggcttaccaactgactaagcttggagtcctggccaagccttaccatgcagggttg
aaggcaggagatcgcacagaggctcagactgattggatgcagggtaaggtgcttgtcatt
gtggccaccatcagctttggcatgggggtggacaaatctaatgtcaggtttgtggcccat
tggaaccttgccaagtcactagccagttactaccaggaatctgggcgtgcggggcgagac
gggctgccctcttcctgcaggacgtactactcccccaaggacagggagcagttgaacttc
ctcatccgcaaggaggtggcccgcaaacaggcaaagcgtggctccgagaaagatcaggac
aaggcttccatcacagacttcgaggccatggtgtcattctgtgagcaagagggctgccgc
catgccaccatctccaagttctttggggaccagaagccggactgtgcgggggcctgtgac
tactgtcgtgaccccaaggctgtgcgggcccagctggagaagggggccactttgtgcacc
aagactggagcagcttggagcacacagcccaggggcccgtttgggtttgaccgtgacctc
tacgccggggggaggaagggctacggctttgagaggcatgatgaggagggctgggagagt
ggtggtgatgatgatggctccgagcatcggaggaaggagtttggagatctcttcaagaaa
caaatgaacctgcgcaaggtttctgagagacacaaagattcatttatccccccagatgat
aactgcccactcagggaggccagcagccagaaaatccccaggctcactgtcaaggcccgg
gagcactgtgtggccctgttacaggaggctctgaacaaccaccaggtggcagcagcagac
acacacagctctgacacactctccttggcagtggatattgaacatgaggtcttcaagatc
accaagtcttccaacctgtacaaagcagctgtcctgaagagagtatcagagatgaagaag
ggaggggctgcctctgcaggaggaggaagagaagggaccagcggctctggggaatccaca
gagataaagactgaatccaaagaagaagcagcctcctcttcctccttgactgaggagcaa
cagggcttcacgcctgcctcacagatctactcactaaagcggaagagaataggagcaggt
ctgaggggctcctccaaccccttccagactgccagtgagctgatgagggcctctaactgt
gaggtctccactacaggtccaggggccaacagtgggacagggagcgggggccctgactgc
ctggctgggtctggagagtcagccggtgaggaggagagggggaagaggaaggagacaaat
actggagatacagcaccaaccatcagctcctccatcagagctaaagccagtgcagtctct
gccttcttgaacagtcccaccaagacaggaggcaaggccctgagcaagaagcagaagcta
gcagaggctgctaagaactcccgcaacattacccagtactttgggaagaaaccgattgaa
aagagtcaagaggtggagataagaaccaatgatgtgtcatctcaggccttttcaatacca
ccccagtcactccccactcaggaaatcacacctgctactgtctccatggataccatccct
atggacactagtcccatggaaatcatccccacagaaaccatccccattgaaactatccct
atggacaccatccccacagaaatcaacaacttggataatgatgaggaggaggttaaagag
gaagctaaactggacttggactctatcacagtgcaaaatgcacatgaaaacaaggctaaa
tcgttgctaaaactaaggctatgtgaagagagggaggccctccctccagccaagcgcagc
tgccccctacaggacagcaggaagaaggtgacctttaaccccaaagtccaggagactgta
ctggagccagggagcccaagcaaagcccccaagcctgtgtctctgaaggaggtggctgac
atcgtggtgcgctgtctagaccccttctatacgcagggcaagtttgccaccaaggagctg
ttcaagtcatttgcccgctacttgtctcatctactagcagaggggaggagtaggggaaga
ggtcaagtgaaaatgcaggccaggaatctgataaagaagttcttcagcagtgtgaagcgc
tgtgagagtgaagcagactggaagcacctgaagggaccacacagcactgagacctctgaa
cacagagggatgggaggaggcgggactatgaacagaaaggtggaggaggataacaacctg
ggggtctga
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integrated database retrieval system
