KEGG   Oncorhynchus mykiss (rainbow trout): 110486612
Entry
110486612         CDS       T07259                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110486612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110486612
Spliceosome [BR:omy03041]
 Complex A
  U2 snRNP components
   U2 related factors
    110486612
 Complex B
    110486612
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 RRM_9 Zip Dsh_C
Other DBs
NCBI-GeneID: 110486612
NCBI-ProteinID: XP_021414017
Ensembl: ENSOMYG00000012429
UniProt: A0A8C7PR92
LinkDB
Position
13:47952948..47960452
AA seq 468 aa
MADFEEFEKQLSENRQEREKERRKKRSGSGSQSRSEKHRSWSKDRGNRSREKRSRSRDRK
SREQRSTSRDHKKHSYSPRRTRRKRTCRYWDVPPPGFEHITPLQYKAMQAAGQIPTIALL
ASSAMSGLAVTPTQVPIVGSQMTRQARRLYVGNIPFGVTEESMAEFFNAQMRLAGLSRAP
SIPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQGQSLKIRRPHDYRPLPGISEQP
AFHVPGVVSTVVPDSPHKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLSKGY
AFCEYVDISATDQAVAGLNGMQLGDKKLIVQRASVGAKNANPTAIIETPVMLQVPGLQGL
QNSGLPTEVLCLLNMVMPEELVDDEDYEEILEDISEECCKYGSVRSIEIPRPVEGVEVPG
CGKIFVEYVSAADCLKAMQALTGRKFANRVVVTKYYDPDMYHRQEFSG
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctgattttgaggaattcgaaaaacagctgagcgaaaaccgacaggagagagagaaa
gagagacgcaagaagaggagcggcagtgggtctcagagccgcagtgagaaacatcgcagc
tggagcaaagaccggggcaaccggagccgagagaagcgaagccgcagtagagacaggaag
agccgggagcagaggagcacctcgcgggatcacaagaagcacagctattctccacgaaga
acaaggaggaaaaggacctgcagatactgggatgtgcctccccctggctttgaacacatc
acaccattgcagtacaaagctatgcaagcggctgggcagatacccacaatagccctgctg
gcatcatctgccatgagtgggttggcagtaacacccacccaagtgcccatagttggcagt
cagatgactaggcaggctcgacgtctctatgttggcaatattccctttggagtgacggag
gagtccatggcagaattcttcaatgcccaaatgaggcttgcaggcctatcgcgagcccct
agcatccctgtgcttgctgtgcagataaatcaggataaaaactttgcattcctagagttc
cggtctgtcgatgagaccacacaggccatggctttcgatggaatcattttccaaggtcag
tcgttgaagataagacgaccacatgactaccggcccctacctggcatttcagagcagcct
gcttttcatgtcccaggtgtcgtgtccacagtggtaccagactccccacataaactgttt
attggaggccttcccaactatctcaatgatgatcaggtgaaggagctcttgacatcattc
ggaccactcaaagctttcaaccttgtcaaggacagtgccacgtcactttccaaaggttat
gccttttgtgaatatgttgacatcagtgcgactgatcaggcggtggctgggctcaatggc
atgcaactgggtgacaaaaagctcatcgtccagagagcaagtgtgggagccaaaaacgcc
aatccgactgccatcatcgagaccccggtgatgctgcaggttcctgggctgcagggactt
cagaactctgggctgcccacggaggtgctgtgcctgctcaacatggtgatgcctgaggag
cttgtggatgacgaggactacgaggagatcctggaggacattagtgaggagtgctgcaag
tacggcagcgtgcgctccatcgagattccccggcctgtcgaaggagtggaggtccctggc
tgtggcaagatctttgtggagtacgtttctgctgcagactgtctgaaagccatgcaggcc
ctcactggccgcaagtttgccaacagagtggtggtaaccaaatactatgatccagacatg
tatcacagacaggagttctcagggtag

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