KEGG   Oncorhynchus mykiss (rainbow trout): 110486661
Entry
110486661         CDS       T07259                                 
Name
(RefSeq) coronin-1A
  KO
K13882  coronin-1A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagocytosis
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagocytosis
    110486661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110486661
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110486661
   04147 Exosome [BR:omy04147]
    110486661
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Coronins
    110486661
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     110486661
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110486661
SSDB
Motif
Pfam: DUF1899 Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_4 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_RIG_2nd EIF3I Beta-prop_EIPR1 DSE1_N PAC11 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Trimer_CC Beta-prop_EML WDCP Beta-prop_WDR75_1st Beta-prop_WDR41 NBCH_WD40 WD40_RFWD3 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR90_beta-prop_4th ASA1 TRM82_WD Beta-prop_HPS5 DUF7310 BLOC1_2 bZIP_1 KIF21A_2nd IPGAL2_N TSC22 MYCBP_helical DNAI3_WD Beta-prop_SPT8 NOCA1_mid Seryl_tRNA_N DUF5798 ZapB Beta-prop_NUP159_NUP214 DivIC DUF6779
Other DBs
NCBI-GeneID: 110486661
NCBI-ProteinID: XP_021414105
Ensembl: ENSOMYG00000003718
LinkDB
Position
13:complement(49104102..49113258)
AA seq 456 aa
MSRKVVRASKFRHVFGQGVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFL
VLPLNKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLVTPL
NDPVVKLEGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVACGEAMVRIDSVHPDLIYS
ACWNRDGSQILTSCKDKTIRVLDPRKGTVIAEKEKTHEGSRPVKAVFVSDGKILSTGFSR
MSERQVALWDPKSFGEPLTLQELDTSSGVLLPFFDPDTGVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTMGPEPSVEANEWFEGKEGQPILISLKDGFATTTKSKEFKVHKSLLKTTSAAMGH
QHDNTGEVHALQKEVKTLKETVEELTKRVSELESKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtccaggaaggtagtcagggccagtaagttccgtcatgtcttcggccagggggtgaag
gctgaccagtgctatgatgacatccgcatctcccagatgacctgggacagcaacttctgc
tctgtcaaccccaagttcgtggccatgattgtggatgccagcggaggaggggccttccta
gtgctgcctctgaacaagacgggtcgtattgacatgtcccagcccacagtctgtggacac
acaggcccagtgctggatattgagttctgtccccacaacgacaacatcattgccagtggt
tcagaggactgcagtgtcatgatttgggagatcccggagggtggcctggtcacgcccttg
aacgaccccgtggtgaagctggaggggcactccaaacgcgtgggcatcctcagttggcac
cccactgcccacaatgtgctcatgagcgcaggctgtgacaacgtggtgatcctatggaac
gtggcgtgtggagaggccatggtgaggatcgactcggttcaccctgacctcatctacagt
gcctgctggaacagggacggctcccagatcctcacctcctgtaaggacaagaccatacgt
gtgctggacccccgcaagggcacagtcattgccgagaaggagaagacacacgaaggctcc
aggcctgtcaaggctgtgtttgtgtccgatgggaagatcctgagcacaggcttcagtcgc
atgagtgagaggcaggtggcactttgggacccgaagagctttggggagccactcaccctg
caggagttggacaccagcagtggtgtcctattgcccttctttgaccctgacactggcgtc
gtctacctctgtggcaagggtgacagcagtatccggtactttgaggtgacggatgaggct
ccctatgttcactacctgtccatgtacagcagtaaggagagtcagaagggcatgggctac
atgcccaagaggggcctggaggtcaacaagtgtgaaatcgccaggttttacaagctccat
gagaggaagtgcgagcccattgtcatgacggtgccccgcaagtctgacctgtttcaggag
gatttgtacccagacaccatgggtccagagccgtctgtggaggccaatgagtggtttgaa
ggcaaagagggccaacctatcctgatctccttgaaggacggttttgcgacaaccaccaaa
tccaaagagttcaaagttcacaaaagtcttctgaagaccacatcagcagccatggggcat
cagcacgataacactggggaggtacatgccttgcagaaggaggtgaagactctgaaggaa
acagtagaggagctgaccaagcgcgtgagcgaactggagagcaagaattga

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