Oncorhynchus mykiss (rainbow trout): 110486704
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Entry
110486704 CDS
T07259
Name
(RefSeq) nucleolar transcription factor 1 isoform X1
KO
K09273
upstream-binding transcription factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110486704
03021 Transcription machinery [BR:
omy03021
]
110486704
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
110486704
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
110486704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_5
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110486704
NCBI-ProteinID:
XP_021414157
Ensembl:
ENSOMYG00000007387
UniProt:
A0A8C7NZ23
LinkDB
All DBs
Position
13:50091337..50113963
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AA seq
788 aa
AA seq
DB search
MILVRGSLQDSSSPHGYKTCFTPCSTTAERKVGGDRTVSRLKKVQMNGEMDASTKDQGEI
IVVNQVWTQDDLLNLLEAMKVNLPQKDLAKYKTSESHLDWEKVAFNSFTGEMCKQKWNEV
SKVIRKFRTLTELIFDAQDFIKNPYKGKKLKKHPDFPKKPLTPYFRFFIEKRAKYAKLHP
EMSNLDLTKILSMKYRGLPDKKKKKYLEDFQKDKETFGHSMSKFREDHPDLVESMAKKGS
NVPEKPRTPQQLWYSHEKKAFLKTHADATTKDIKDSLGKQWTQLSDKKRLKWIAKSLEMH
KAYEEVMKGFIETHPELNMSNEDIVKSTLTKAERHLKDKSDGRPDKPPPNGYSMFCAELM
SSMKDVPSTERMVMCSQQWKLLKQNEKDGYQKRCEQRKKEYEVEMNRFLCSISEEEQQRV
LGEQKMIGFKKGSGGSKKKSRAKPSPEKPKRPISAMFIFSEEKRPKLQQERPDLSDSELT
RLLARMWNELSDKKKEKYKRLETVLKAESVKKGQEERSQLPDTPKTAQDIWQQSVIGDYL
ARFKNDRPKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRSPATIIASGKKM
KFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEIGGRWQRQPQKEKDRYKKIAEE
KQKLYKVELERWLASLSSQERNVYKEYNSQKRKTPVKPGGTAAKVKAKVIKKSDTEDEDE
DDEELEKEAASSDNDSSSAEDSEEEDDDDDNEEDDDDDDEEADDKENKSEGSSSSDSSSV
ETSDSDSD
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgatcctggtgcggggcagtcttcaagactcatcctcgccacacggctacaaaacctgc
tttaccccgtgttcaacaacagctgaaagaaaagtcgggggggatagaaccgtttcacgg
ttaaagaaagtacagatgaatggagaaatggacgcgtccactaaagaccaaggtgagatc
atagtagtcaatcaagtgtggacgcaggacgaccttctgaatctgctagaggccatgaaa
gtcaatcttccccagaaggacctggccaagtacaagacgtcggagtcccatctggactgg
gagaaggtggccttcaactcattcacaggagagatgtgcaaacagaagtggaacgaggtc
tccaaagtgatccgcaaatttcgcacattaacagagctgatttttgatgcccaagacttc
atcaagaacccttataagggcaagaagctgaagaagcatccagacttccctaaaaagccc
ctgacgccatatttccgcttcttcattgagaagagggccaagtatgccaagctgcaccct
gagatgagcaacctagacctcaccaagatcctctccatgaagtacagagggctgcctgac
aaaaagaagaaaaaatatctagaagacttccagaaagacaaagaaacgtttgggcacagc
atgtcaaagttcagggaggaccatcccgacctggtggagagcatggcaaagaaaggttct
aatgtgccagagaaacccaggacgcctcagcagctatggtacagtcacgagaagaaggcc
ttcctcaaaacacacgcagacgcgaccaccaaagacattaaagacagtcttgggaagcag
tggacacagctgtcagacaaaaagagactcaagtggattgccaagtccctggagatgcac
aaagcatatgaggaggtgatgaagggcttcattgagactcacccagagctcaacatgagc
aacgaggacatcgtcaagtccacccttaccaaggctgagagacatctgaaggacaaatct
gatggcaggccagacaaaccacccccgaatggttactccatgttctgtgctgagttgatg
tctagtatgaaggacgtacccagtacagagcgcatggtcatgtgcagccagcagtggaag
ctgctaaaacagaacgagaaggacggctaccagaaacgctgcgagcagagaaagaaagaa
tacgaagtcgagatgaaccggtttctttgtagtatatcagaggaggagcagcagcgtgtg
ctgggggagcagaagatgattggctttaagaagggtagcgggggcagcaaaaagaagagc
agagcaaagcctagcccagagaagcccaaaaggcccatctcggccatgttcatcttctct
gaagagaaacgacccaagctgcagcaagagcgaccagacctgtctgacagtgagctcacc
aggctgctggcacgcatgtggaacgagctctcagataagaagaaggagaagtacaagcgc
cttgagacggtcctgaaggcagagtctgtgaagaaaggacaagaggagcgcagccagctg
ccagacacacccaagactgcacaggacatctggcagcagagcgtcataggagactacctg
gccaggttcaagaacgaccggccaaaagcccagaaagccatggaagccacttggaacacc
atggagaagaaggagaaaatcatgtggatcaagaaggcagctgaggaccagaaacgatac
gagagggagctgagtgagatgcgctctcctgcaaccatcattgcctcagggaagaagatg
aagtttgacggtgaacccaagaaacccccatcgaatggctaccagaagttctctcaggag
atgctgtctaacggagagctgaaccacctccctatgaaggagcgcatgggggagatcggg
ggccgctggcagaggcagccccagaaggagaaggaccgctacaaaaagatcgctgaggag
aaacagaagctgtacaaagtagagctggagcggtggctggcgagcttgtcctcacaagaa
agaaatgtgtacaaggagtacaactcacaaaaaagaaaaaccccagtgaaaccaggaggc
actgcagccaaagttaaggccaaggtaatcaagaagtcggacacagaggacgaggatgaa
gatgacgaggagttagagaaggaggctgcctcatcagataacgattcgtccagtgccgag
gacagtgaggaggaagatgatgatgacgataatgaggaagacgacgatgatgatgatgag
gaggcggatgataaagagaacaagtcggaggggagtagcagcagtgactcgagctcagtg
gagacatcggactctgattcagactga
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