Oncorhynchus mykiss (rainbow trout): 110486741
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Entry
110486741 CDS
T07259
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110486741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110486741
03012 Translation factors [BR:
omy03012
]
110486741
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110486741
Translation factors [BR:
omy03012
]
Eukaryotic type
Release factors
110486741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
110486741
NCBI-ProteinID:
XP_021414239
Ensembl:
ENSOMYG00000015015
UniProt:
A0A8C7QDZ9
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Position
13:complement(51427685..51441706)
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AA seq
579 aa
AA seq
DB search
MDPRDAAPDSWEQEDDVEAPVDGKLDSEFAALNVNAKPFVPNINAVEFVPSFFQKGPSED
PDSGAEVEPVVVTMEVAETAAPVENGDSEMTTEETWDLKGVESNEEEPGGGPGGDGGPIV
VEEILEEEVLEEEEDVPIIPKVVALPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGM
VEKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAP
GHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIILVN
KMDDPTVNWSLERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPVESCTWYT
GLPFIPHLDSLPNLNRASDGPVRLPIVDKYKDMGTVILGKLESGSISKAQQLVMMPNRHT
VEVLSLLSDDVETDDASPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVII
EHKSIICPGYNAVLHIHTCIEEVQITALICLVDKKSGEKSKTRPRFVKQDQVCIARLRTA
GTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVAERD
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacgctgcccctgattcctgggaacaagaggatgatgttgaggccccg
gtcgacgggaaactcgattccgaattcgccgccctcaacgtgaatgccaaaccgtttgtc
cccaacataaatgccgtcgaatttgtcccgtccttctttcagaaaggcccctcggaagat
cctgattccggtgcggaagttgaaccagttgttgtcaccatggaggttgcagaaactgca
gccccggtggagaacggcgactctgaaatgaccacagaggagacatgggacctgaaaggg
gtggagtccaatgaggaagaaccaggaggagggcctggtggtgacgggggaccaatagtt
gttgaggagattctggaggaggaagtcctagaggaggaggaagacgtgccaatcatacct
aaagtggtcgccctaccaccagacgcgcccaagaaggaacatgtgaacgtggtgttcatc
ggtcatgttgatgctggcaagtctaccattggaggacaaatcatgtatttaacaggcatg
gtagagaagagaactctggagaagtatgaaagagaagccaaggagaagaacagggaaacc
tggtacctctcctgggctctggacactaaccaggaggagcgagacaaggggaagactgtg
gaggtgggcagagcgtactttgaaactgagaaaaagcactttaccatcctggacgctcca
ggccacaaaagctttgtgcccaatatgatcggaggagcgtcgcaggctgacctggctgtg
ctggtgatctcagccaggaagggagagtttgagacaggctttgagaagggtggacagaca
cgggagcacgccatgttggccaaaacggcgggggtgaagcatctgatcatccttgtcaac
aaaatggacgaccccacagtgaactggagcctagagaggtacgaagaatgcaaggaaaaa
ctagtgccatttttgaagaaggttggcttcaaccccaagaaagacattcacttcatgccc
tgctctggcctcacaggagccaacctcaaggagcctgttgagtcgtgcacttggtataca
gggttaccattcattccacatctggacagtttgccaaacttaaacagagcgagcgacgga
ccagtcagattacccatcgtagacaaatacaaggacatgggtactgtcatcctggggaaa
ctggagtcggggtccatcagtaaagcacagcagcttgtcatgatgccaaacaggcacaca
gtggaggtgttgagcttgctgagtgatgatgtggagacagacgatgcttctcctggagag
aacctgaagctgagactgaagggcatcgaggaggaggagatcctgccaggcttcatcctc
tgtaacgctgagaacctctgccactctggacgcacctttgacgcccagattgtcatcatt
gaacacaagtccattatctgccctggatacaatgctgtcctccacatccacacctgcatc
gaagaagtgcaaattacggccttaatctgtctggtagacaagaagtcgggagagaaaagt
aagacgcgaccgcgctttgtgaaacaggaccaggtgtgcattgcccgtctgcgcaccgcc
ggaaccatctgccttgaaaccttcaaagacttcccccagatgggacggttcaccctacgg
gatgaaggtaagaccattgccattggtaaggtgttgaagctcgttgctgagagggactga
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