Oncorhynchus mykiss (rainbow trout): 110486965
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Entry
110486965 CDS
T07259
Name
(RefSeq) transcription factor Sox-9-B isoform X1
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110486965
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110486965
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
110486965
NCBI-ProteinID:
XP_036797691
Ensembl:
ENSOMYG00000035344
UniProt:
A0A8K9WPT6
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Position
13:complement(61546265..61550711)
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AA seq
489 aa
AA seq
DB search
MNLLDPFLKMTDEQEKCFSDAPSPSMSEDSVGSPCPSGSGSDTENTRPSDNHLLLGPDGV
LGEFKKADQDKFPVCIRDAVSQVLKGYDWTLVPMPVRLNGSSKNKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPR
RRKSVKNGQSEPEDGEQTHISSGDIFKALQQADSPASSMGEVHSPSEHSAGQSQGPPTPP
TTPKTDLAVGKADLKREGRPLQEGTGRQLNIDFRDVDIGELSSDVISNIEAFDVHEFDQY
LPPHGHPGMPGINGAQTSYTGSYRGISSNSIGQVGAGGHGWMSKQQQQPISILSGGGGTG
GEQGQSQGRTTQIKTEQLSPSHYSEQQGSPPQHVTYGSFNLQHYSASSYPSITRTQYDYS
DHQGGANSYYSHAGAQGSGLYSFSSYMSPSQRPMYTPIADPTGVPSVPTQTHSPQHWEQQ
PVYTQLSRP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatctactcgaccccttcctgaagatgacagacgaacaggagaagtgtttctctgac
gctccaagccccagcatgtctgaggattcggtcggctcgccgtgcccgtctggctccggt
tccgacaccgagaataccaggccgtccgataatcatctcttactgggtccagacggcgtg
ctcggcgagttcaagaaggctgaccaagacaagttccctgtatgtatcagagatgcggtg
tctcaggtgctgaagggttacgactggaccttggtgcccatgcccgtccgactgaacggc
tccagcaaaaacaagccacatgtcaagagacccatgaacgcgttcatggtgtgggctcaa
gccgcccggaggaaactggcggaccagtacccacatctccacaatgcagaactcagcaaa
accctggggaaactctggagattactcaacgaaggcgagaagcgtccgttcgtagaggag
gctgaacgcttgagggtgcagcataagaaagatcaccccgactacaagtaccagcccaga
aggagaaaatccgtgaagaacgggcagagcgagccagaggacggcgaacaaacccacatc
tcttccggtgacatctttaaagctctccagcaagccgactcgcccgcgtccagcatggga
gaagtgcattctcccagtgaacattcagcaggccagtcccagggcccacctacaccaccg
accacccccaaaacagacctggctgtgggcaaggccgacctgaagcgtgagggccgcccc
ctgcaagagggcacgggccgccagctcaacatcgacttccgagacgtggatatcggcgag
ctgagcagcgacgtcatctccaacatcgaagctttcgatgtccatgagttcgaccagtac
ttaccgccccacgggcaccccggcatgcctggcatcaacggcgcccagacgagctacacg
ggcagctaccgcggcatcagctctaactccattggccaggtgggtgctggaggccatggc
tggatgtccaagcagcagcagcagcccatctccatcctgagtggaggtggaggtactggg
ggagagcaaggccagagccaggggagaaccactcagatcaagacggagcagctgagcccc
agtcactacagtgagcagcagggctcccctccccagcatgtcacctatggttcattcaac
ctgcagcactacagtgcctcatcctacccctccattacccgcacccagtatgactattct
gatcaccagggcggcgccaactcttattatagccatgcaggtgcccaaggctcagggctt
tattccttcagcagctatatgagccccagccagaggcccatgtatacccccatcgccgac
cccaccggagtgccctcggtgcccacccagacccacagtccacagcactgggagcagcag
cctgtctacacacagctctccaggccctga
DBGET
integrated database retrieval system
