Oncorhynchus mykiss (rainbow trout): 110487113
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Entry
110487113 CDS
T07259
Symbol
zgc:86896
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A-A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04517
IgSF CAM signaling
omy04530
Tight junction
omy04810
Regulation of actin cytoskeleton
omy05100
Bacterial invasion of epithelial cells
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110487113 (zgc:86896)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110487113 (zgc:86896)
09144 Cellular community - eukaryotes
04530 Tight junction
110487113 (zgc:86896)
09142 Cell motility
04810 Regulation of actin cytoskeleton
110487113 (zgc:86896)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110487113 (zgc:86896)
05100 Bacterial invasion of epithelial cells
110487113 (zgc:86896)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110487113 (zgc:86896)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110487113 (zgc:86896)
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Arp2/3 complex
110487113 (zgc:86896)
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
110487113 (zgc:86896)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WDR55
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
EIF3I
Rax2
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_ELP1_1st
Motif
Other DBs
NCBI-GeneID:
110487113
NCBI-ProteinID:
XP_036797931
LinkDB
All DBs
Position
13:complement(70029544..70042528)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLYSFGLEPLSCHAWNKDRTQIAVSPNSSVVIIYEKKGNEWAKIHELTEHSGRITGIDW
APDSNRIVTCASDRNAYVWTLKDKVWKPTLVLVRINRAATFVKWSPLENKFALGSGARLI
SVCYFEKENDWWLSKHIKKSIRSTVMCLDWHPNNILLAAGSSDFHCRIFSAYIKEIEDKP
GPTAWGAKMPFGEMLLETKDCGGWVHSVSFSPSGDHLAWVAHNSSISVADATQGKEMTQL
TTDRLPLVSVLYVSPTEMVAAGHDCCPFQFSYKGPGSLKFVKKLDIPKQTSRGSMSAMQH
FRNLDKKATDDESNELGCLHQNSITQLCIVSGTKAHVDKYSSVGLDGAMVLWDFKH
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtacagctttgggttggagcctctctcctgtcatgcctggaataaggacagg
acacagattgctgtcagccccaacagcagtgtggtgatcatctatgagaagaaggggaac
gagtgggccaagatccacgagctgactgagcacagtggacgaatcacaggcatcgactgg
gctccggattcgaaccgcatcgtgacgtgtgcatcggaccgtaatgcgtacgtgtggacc
ctgaaggacaaggtgtggaagcccactctggtgttggtgaggatcaaccgggctgctact
ttcgtcaagtggtcccctctggagaataagtttgccctgggcagtggagctcgcctcatc
tctgtctgctacttcgagaaggagaacgactggtggctcagtaagcacataaagaagagc
atccggtccacggtgatgtgtctggactggcaccccaacaacatcctgttggctgcagga
tcctctgacttccactgcaggatcttctctgcctacatcaaggaaatcgaggacaagcca
ggcccgacagcttggggggctaagatgccatttggggagatgctgctggagaccaaggac
tgtggaggttgggtacacagtgtctccttctcccccagcggagaccacctggcctgggtc
gctcacaacagcagcatcagtgtggccgacgccacccaggggaaagagatgactcagctg
acaacggaccgcctccctctagtgagcgtgctctatgtgagccccacagagatggttgcc
gcgggccatgactgctgtccgtttcagttctcctataagggccccggcagtctgaagttt
gttaagaagctggacatccccaagcagacctctaggggcagcatgtccgccatgcaacac
ttccgcaatctggataagaaggctactgacgacgagagcaacgagctgggctgcctgcac
cagaacagcatcactcagctgtgtattgtgtcaggaactaaggcccacgtggacaagtac
agcagtgtgggtctggatggagctatggtcctctgggacttcaagcactga
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