Oncorhynchus mykiss (rainbow trout): 110487114
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Entry
110487114 CDS
T07259
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 1
KO
K17908
autophagy-related protein 18
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04136
Autophagy - other
omy04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110487114
04136 Autophagy - other
110487114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110487114
03029 Mitochondrial biogenesis [BR:
omy03029
]
110487114
Membrane trafficking [BR:
omy04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
110487114
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
110487114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RSE1_2nd
ANAPC4_WD40
Beta-prop_HPS5
WDR55
Beta-prop_EML
Beta-prop_NWD2_C
Beta-prop_IFT140_1st
BCAS3_WD40
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
RMC1_N
EIF3I
Motif
Other DBs
NCBI-GeneID:
110487114
NCBI-ProteinID:
XP_036797929
UniProt:
A0A8K9XYI3
LinkDB
All DBs
Position
13:complement(69985479..70019923)
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AA seq
463 aa
AA seq
DB search
METGEGADGPSGPGEPGAGPGTELTGLGCASFNQDSTSLAVGTKTGYKLFSVTSVDKLDC
IYESETPDVYIVERLFSSSLVVVVSLSIPRRMNVYHFKKGTEICNYSYSNNILSVRLNRQ
RLVVCLEESVYIHNIKDMKLLKTLLNTPSNPSGLCALSINHSNSYLAYPGSSTIGEIIVY
DANNLSTVTMIPAHDSPLAALTFNSSGTKLASASERGTVIRVFSIPEGQRMFEFRRGMKR
YVNISSLSFSPDAQFLCASSNTETVHIFKLEQHGPSGEEECPTWGSYVGKMFSAASSYLP
AQVSGVMSQERAFATVRLLVAGQRNVCTLATIQKLPRLLVASSDGQLFVYNVDPQDGGEC
VLAQKHRLFGEDEDKEEGVESEGSEVTVPVQACPSYAATVAIPATGPVTTTLTGYSEDGG
AKKGEVIPEHEFAAGPVCLDDENEFPPINWCRDGTRGGQGRRL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggagacgggagagggagcagacggtcctagcggaccgggtgaaccgggagccgggccg
gggacggagctgacggggcttggctgcgcctctttcaaccaagactccacgtcattggca
gtgggaaccaagacaggctataagctgttctctgtgacctcagtggacaaactggactgc
atctacgagagcgagaccccagacgtgtacatcgtggagcggttgttctccagcagtctg
gtggtggtggtcagtctctccatccccagacggatgaacgtctaccacttcaagaaggga
acggagatctgcaactacagctacagtaacaacatcctctctgtcagactcaacagacag
agactggtggtgtgtctggaggagtcagtgtacatccacaacatcaaagacatgaagctg
ctgaagacccttctcaacacgccctccaacccctcaggtctgtgtgctctgtccatcaac
cattccaactcgtacctggcctacccaggcagctccaccatcggagagatcatagtttac
gatgccaacaacctgagcactgtcacaatgatcccggcccatgacagtcccctggctgct
ctcacctttaactcgtcaggcaccaagctggccagcgcctcagagaggggtactgtaatc
cgtgtgttctccatcccagagggacagcgtatgtttgagttccgcagagggatgaagagg
tacgtcaatatcagttccctgtccttcagtcctgacgcccagttcctctgtgcctccagc
aacactgagaccgtacacatcttcaaactagaacagcacggacccagtggagaggaggag
tgtcctacctggggatcctacgtagggaagatgttctctgcagccagcagctacctccca
gcccaggtgtctggcgtgatgagtcaggaaagagccttcgccactgtacgcctcctagtg
gccgggcagaggaacgtctgtaccctcgccacgatccagaagcttcctcgtctgctggtg
gcctcctccgacggacagctgttcgtctataacgtcgaccctcaggatggaggagagtgc
gtcctggctcagaaacacagattgtttggtgaggatgaggacaaggaggaaggggtggag
tcagaagggtcagaggtcacggtgcccgtccaggcatgtccatcatacgccgccactgtt
gccataccagccaccggtccagtcactaccacgctcacaggttactctgaggatggtggg
gctaagaagggagaggtgatcccagaacatgagtttgccgctggtcccgtctgtctggat
gatgagaacgagtttcctccaataaattggtgccgcgacggaactcgaggtggccagggg
cgtcgcctgtga
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