Oncorhynchus mykiss (rainbow trout): 110487272
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Entry
110487272 CDS
T07259
Symbol
lingo4b
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4b
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110487272 (lingo4b)
Membrane trafficking [BR:
omy04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
110487272 (lingo4b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_14
ig
LRR_9
Ig_2
LRRNT
V-set
Ig_VEGFR-1-like_5th
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
110487272
NCBI-ProteinID:
XP_021414869
Ensembl:
ENSOMYG00000000277
UniProt:
A0A8C7LU60
LinkDB
All DBs
Position
2:32525732..32543737
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AA seq
612 aa
AA seq
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MFVESVVRWGAWSILLQCGLLGVSAGDFPWPCPARCVCRLETLEVNCSDKQLTSVSQGFA
SGTQRINLSRNKLKTLGRRQFFGLTQLEDLDISDNVIAMIEVEAFQGLQNLKTLCIRSNR
LKIISVGVFSGLPSLRFLDLSENEILVFLDYTFRELVSLHQLEAGENDLVFISQRAFTGL
QNLQELNLDRSNLTSIPTEALSQLQSLTRLRMFRLTISALPNNAFRHLHRLRSLVISHWP
LLDTLASNSLIGLNLTSLVISSCNLSAVPYQVLRHLVYLGYLDLSYNPITAIQGNLLGDL
LRLQELHLAGGNLLRIEPGAFRGLAYFRLLNVTSNQLSTLEESAFHSVGNLQVLRLDGNP
LACDCRLLWVVRRRQRLNFDGRQPTCSTPDMVREREFRDFSEKELPRLFTCRQARIVDRR
SQEVRVEEGTTVLFSCKADGDPMPSFTWLSAQRIPLSTTGRIRVLSNGTLEVRYAQVQDS
GTYRCTAGNAAGNDSLYVSLYVKGFPRNRTMPFFTDEGWIESSHAPTANSSAQVANQYPF
DAKTLIIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDYVPRTSMGVGGGGGGA
GGDAGKFTMKLI
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtctgttgtccgatggggggcatggagcatcttgctccagtgtggatta
ttgggtgtgtcagcaggggacttcccctggccttgccctgccaggtgtgtgtgtcggctt
gagactttagaagtgaactgctctgacaaacagctgacttctgtgtctcagggcttcgct
agtggcacccagcgcattaacttatctcgtaacaagctgaagacactgggtcgtcgccag
ttctttggattgacccagctagaggatctggacattagtgacaatgtcatcgccatgatt
gaagtggaggctttccagggcctgcagaacctcaagaccctgtgcattaggagcaaccgc
ctcaagatcatctctgtgggggtcttctccggactgcccagcctgcgcttcctggacctg
agtgagaacgagatcctagtctttctggactacaccttccgtgaattggtgagcctgcac
cagctggaggctggggagaatgatctggtgttcatctcccagcgggcctttaccggcctg
cagaacctgcaggagctcaatctggaccgcagcaacctgacctccatccccaccgaggca
ctgtcccagctccagagcctgactcggctgcgcatgttccgcctcactatttcggcgctg
cccaacaatgccttccgccacctgcatcgactgcgcagcctcgtcatctcccactggccc
ttgctggacaccctggccagcaacagcctgattggcctcaacctcacctcgctggtcatc
agcagctgcaatctcagtgctgtcccataccaggtgctgcgccacctggtctaccttggc
tacctggacctgtcctacaaccccatcacagccatccaaggtaacctgctgggggacttg
ttgcggctgcaggaactgcacctagctgggggcaacctgctccgtatcgagccaggggcc
ttcagggggctggcttacttccgtctgctcaacgtgacatccaaccagctcagcacgctg
gaggagagtgccttccactcggtggggaatctgcaggtcctgcggctagatgggaacccc
ctggcctgtgactgccgactgctctgggtggtccgccggcgacagcgtctaaacttcgac
ggccgccaacccacctgctccaccccggacatggtgcgagagcgggaattccgggacttc
tcagagaaagagctcccgagactgttcacctgccggcaggcccgaattgtagaccgcagg
tcccaggaggtcagggtggaggagggcactacggtgctcttctcctgcaaggcggacggt
gacccaatgccctcctttacctggttgtcagcccagcggattccgctctccactacgggg
cgcatcagggtgttgtccaatgggactctagaggtacgctatgcccaggttcaggacagc
ggcacataccggtgcacagcgggcaacgcagctggcaacgacagcctgtacgtcagcctc
tatgtgaagggtttcccacgtaaccgcaccatgccctttttcaccgacgaaggctggata
gagtcctcacacgcccctactgccaactcctctgcccaggtggccaaccagtacccgttt
gatgccaagactctgatcatcgccaccaccatgggcttcctgtccttcctcagctcagtg
gctatctgcttcgtcttcatgttcttctggagccagagcaaggggcaaatcaaacacaca
gccaccatcgactatgtgccccgtacctcaatgggggtaggaggaggaggaggaggggct
ggaggtgatgctggcaagttcaccatgaagcttatctaa
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