Oncorhynchus mykiss (rainbow trout): 110487284
Help
Entry
110487284 CDS
T07259
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110487284
Enzymes [BR:
omy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110487284
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110487284
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
110487284
NCBI-ProteinID:
XP_036798488
Ensembl:
ENSOMYG00000017268
LinkDB
All DBs
Position
13:13681729..13689683
Genome browser
AA seq
439 aa
AA seq
DB search
METEIETVDETKECCLMYLAECLLPKFEKNFYNEHPELQRMTQYDIDEFRRKKEITVSGT
GCPRAMTSFHQAQFPQYVMDVLLSQDFKEPTSIQSQGFPLALSGRDMVGIAQTGSGKTLA
YLLPAIVHINHQPYLERGDGSICLVLAPTRELAQQVQQVAHDYGKTSRIKSTCVYGGAPK
GPQIRDLERGTEICIATPGRLIDFLEAGKTNLLRCTYLVLDEADRMLDMGFEPQIRKIVD
QIRPDRQTLMWRGGGFSGSAPVRRCWCMRRVRGKRGASLGPLISPSPPAPPSEPGLIRTG
QGVTDYPCKTTLKGSSSPSSLISPSSPITFLSHLSKPLSHKDVEDIKFVINYDYPNLSED
YVHRIGRTARSTNKGTAYTVFTLGNLRQARDLVRVLEEARQAINPKLLQLVNSGHGGGGG
ETGLIHTIGSTRTILCWLN
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgagatagagaccgtggacgagacaaaggaatgctgtttgatgtatcttgct
gaatgtctactgcccaagtttgagaagaacttctacaacgagcacccagagctccagcgc
atgactcagtatgacatagatgagttccgcaggaagaaggagatcacagtcagcggtact
ggctgccccagggccatgaccagcttccaccaagcacagtttccccagtatgtaatggat
gtgctactgagtcaggacttcaaggagcccacatctatccagtcacagggcttccctctg
gccctgagtggcagggacatggtgggcatcgctcagactggctccggcaagaccctggca
tatctgcttcctgccattgtgcacatcaaccatcagccctatctagagaggggagacgga
tctatttgcctggtcttggccccgaccagagagttggcccagcaggtgcagcaggtggct
catgattatggaaagacctcccgcatcaagagtacctgtgtctatggaggagcacccaag
ggaccgcagatacgtgacctggagagaggtacagagatctgcatcgccaccccggggcgt
ctcatagacttcctggaggcagggaagaccaacctgctgcgctgcacctacctggtgctg
gacgaggctgaccgcatgctggacatgggcttcgaaccacagatacgcaagatcgtggac
cagatccggccggaccggcagactctgatgtggagggggggggggtttagcggttctgct
cctgtccgacgttgctggtgtatgcgaagggtgagggggaaacggggggctagtttgggc
cccctcatctctccctcccccccagcgcctccaagcgaaccagggctgatcaggacagga
cagggggtgactgactacccttgtaaaacaactctaaaggggtcctcctctccctcctct
ctcatctctccctcctcacccatcaccttcctctcccacctctcaaaaccactttcccac
aaagacgtggaggatatcaagtttgtcatcaactatgactaccccaacttgtctgaggac
tacgtgcacaggatcggccgtacagcccgcagcaccaacaagggcacggcctacaccgtc
ttcaccctgggtaacctacgccaggccagggacctggtccgagtcctggaggaggcccgg
caggccatcaatcccaaactgctgcagctggttaactctggacatgggggaggaggtggt
gagactggcttgattcacactatagggtcaacccgaaccatactatgctggctcaattga
DBGET
integrated database retrieval system
