Oncorhynchus mykiss (rainbow trout): 110487488
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Entry
110487488 CDS
T07259
Name
(RefSeq) NLR family CARD domain-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110487488
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110487488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
NACHT
FISNA
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
110487488
NCBI-ProteinID:
XP_036798368
Ensembl:
ENSOMYG00000036427
LinkDB
All DBs
Position
13:complement(68226402..68250364)
Genome browser
AA seq
1032 aa
AA seq
DB search
MDDSLQRAIVNHKDSLKRRYECVIGIEKAGIQSPLNRIYTELYITEGKREGFNNEHEVWQ
LEAASRTPTSHDTAIHCNDIFKPLPGQERSIRTVLTKGIAGIGKTVSVQKFILDWAEGKA
NQDVDIMFVLSFWELNLIKDQQYTLLGLLNYFHTELDIGNAKKLTACKVMLILDGLDQSR
FPLDFQHNEKVSDVTQTSSVDVLLTNLIKGNLLPSALLWITSRPAATNQIPPEYVDQVTE
VRGFNDPRKEEYFRKRFSDEDLASRIISHIKTSRSLHIMCHMPVFCWISAIVLEHMLCTD
KRREMPTTLTEMSIHFLLIQTRLKNQKYHGRDEMDQEELVESDKEIILKLGKLAFEHLEK
GNLMFYEEDLKECGIDVKEASVYSGLCTQIFKEKSVFFQRVVYCFDHLSIQEFLSAVYIY
HCYTNKKMDELKPFLKRKSRAASEELTLHELLKSAVDKALESKNGHLDLFVYFLHGMSLE
SNQKLLRGLVTQTESSPESVQRTIRSLKVMQKNMSPERWINLFHCLIEMKDQSVQEEIQA
YWRSENTSKILSLAHCSALAYMLQISEVVLDVFDLKEYKTSEEGRRRLLPALRCCRKALL
TDCHFSDTLCEVLASVLSSNSSHLVELDLNECYDLTDSGLTLLSAGLGNPQCKLDTLRVT
DCNLTDTSCEVLVSALSSNTSHLREMDLSNNDLKDSGVKLLSAGLGNPHCKLGTLRLAGC
KLTEASCEVLASVLSRNSSHLRELDLSNNDLKDSGVKLLSAGLGNPHCKLETLSLSLCGV
EEEGCASLVSALRSNPSHLKELDLNNNRSGDSGVRLLSAGLEDPHCRLEKLNVEPGGVHT
IKPWPRKYACDLTLDPNTVNIKLSLSEDNRKVTRSEEAQPYPDHPERFVDCEQVLCREGL
TGLCYWEAERSGIGADVGVTYKGISRREGGDEDCVIGQNDKSWSLSCFNNRYTAWHNDNY
TDIDVPSSSSHRLGVYLDWPAGTLSFYRVSSDTLTHLYTFHTTFTEPLYPGFQLWDDSSS
MSLCQVVPVPNT
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagcctacagagagctatagtaaaccacaaagacagtctgaaaaggaggtat
gaatgtgtgataggcattgaaaaagcagggattcaaagtcccctcaacaggatttacaca
gagctttacattacagagggaaagcgtgaagggtttaacaatgaacatgaggtgtggcag
ctagaggcagcatccaggacaccaacctcacatgacacagcaatccactgcaatgacatc
tttaaacccttacctggccaagagagaagcatcagaaccgtgctgacgaagggcatcgct
ggcatcggaaaaactgtctctgtgcagaagttcatcctagactgggctgaagggaaggca
aaccaagatgtggatatcatgtttgttctttctttctgggagctgaacttgattaaagat
cagcagtacactcttcttggacttctaaattatttccacacagaactagacataggcaat
gcaaagaaactcactgcctgtaaagttatgttaatcttggatggtttggatcaaagcaga
tttccattggatttccagcacaacgaaaaggtgtctgatgtcacacagacatcgtctgtt
gatgttctgttgacaaacctcatcaaggggaatctgcttccctctgctctcctttggata
acctcccgaccagcagcaaccaatcagatcccccctgagtatgttgaccaggtgacagag
gtacgagggttcaatgacccacggaaggaggagtacttcaggaagagattcagtgatgag
gacctggccagcagaatcatctcacacataaagacatcaaggagcctccacatcatgtgc
cacatgccagtgttctgttggatttctgcaatagtccttgaacacatgttgtgtacagac
aagaggagagagatgcccacgactctgactgagatgtccatacacttcctgctcattcag
accagactgaagaaccagaagtatcatggaagagatgagatggatcaagaggagctcgtg
gagtcagataaggagattattctgaagctggggaagctggcgtttgaacatctggagaag
ggtaatctcatgttctatgaagaagacctgaaagagtgtggcattgatgtcaaagaagcc
tcggtgtactcaggattgtgcacacaaatctttaaagaaaagtctgtgttctttcagaga
gtggtgtactgctttgatcatctgagcattcaggagtttctctcggctgtctacatttac
cattgttacacaaacaagaaaatggatgaactgaagcccttcctcaagagaaagtctaga
gctgcgtctgaagagctaaccttgcatgagctgctgaagagtgctgtggataaagccttg
gagagtaagaatggacacctggacctttttgtctacttccttcatggcatgtcactggag
tccaatcagaaactcctacgaggtctggtgacacagacagaaagcagtccagagagcgtc
cagagaacgatccgatcccttaaggtgatgcagaagaacatgtcccctgagaggtggatc
aatctcttccactgtctgatagagatgaaagaccagtcagtgcaggaggaaatccaagca
tactggaggtcagagaacacatccaaaatcctctcccttgctcactgttcagcgctggcc
tacatgctgcagatatcagaggtggttctggatgtgtttgacctgaaggaatacaagaca
tcagaggagggtcgtaggagactgctccctgccttgaggtgctgcaggaaagctctactc
actgactgtcacttctcagacacgttatgtgaagtgttggcttcagttctcagctcaaac
tcctcacatctggtagagctggatctgaatgaatgttatgacctgacggattcaggactg
acactgctctctgctggactgggaaatccacaatgtaaactggatactctgagagtcact
gactgtaacctcacagacacgtcctgtgaagtgttggtctctgctctcagttcaaacacc
tcacatctgagagagatggatctgagtaacaatgacctgaaggattcaggagtgaagctg
ctctctgctggactggggaatccccactgtaaactggggactctgagactcgctggctgt
aaactcacagaagcatcttgtgaagtgttggcctcagttctcagccgaaactcctcacat
ctgagagagctggatctgagtaacaatgacctgaaggattcaggagtgaagctgctctct
gctggactggggaatccccactgtaaactggagactctgagcttgtcgctctgtggagtt
gaagaggaaggctgtgcatctctggtctcagctctgaggtcaaacccctcacacctgaaa
gagctggacctgaataacaatcgctcaggagactcaggagtcagactgctctctgctgga
cttgaggatccacactgcagactggagaaactcaatgtggaacctggtggagtgcacaca
atcaaaccttggcctagaaaatatgcctgtgatctcacactggacccaaacacagtaaac
ataaagctctctctgtccgaggacaacagaaaggtgacacgtagcgaagaggctcagccg
tatcctgatcacccagagagatttgtggactgtgaacaggtgctgtgtagagagggtctg
actgggctctgttactgggaggcagagaggagtgggataggggctgatgtaggagtgaca
tataaaggaatcagcaggagagaagggggggatgaggactgtgtgattggacagaatgac
aagtcctggagtctgagctgctttaacaaccgttacactgcctggcacaatgataattac
actgacatagacgtcccctcctccagctcccacagactaggggtgtatctggactggcca
gccggcactctgtccttctacagagtctcctctgacacactgacacacctgtacacattc
cacaccacattcactgagcccctctatccagggtttcagctttgggatgactcctcttca
atgtccctgtgtcaggtggtccctgtgccaaacacttga
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