Oncorhynchus mykiss (rainbow trout): 110487489
Help
Entry
110487489 CDS
T07259
Name
(RefSeq) LOW QUALITY PROTEIN: NLR family CARD domain-containing protein 3
KO
K22614
NLR family CARD domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
omy04054
]
110487489
Pattern recognition receptors [BR:
omy04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
110487489
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLRC4_HD2
FISNA
NACHT
NOD2_WH
PRY
LRR_6
SPRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_UBOX
zf-RING_2
zf-RING_5
LRR_4
TRAF3_RING
Prok-RING_4
zf-rbx1
DUF1512
Motif
Other DBs
NCBI-GeneID:
110487489
NCBI-ProteinID:
XP_036798366
Ensembl:
ENSOMYG00000036329
ENSOMYG00000039733
LinkDB
All DBs
Position
13:68396647..68426373
Genome browser
AA seq
1134 aa
AA seq
DB search
MKFCRERKGALPLDKVWLEAHHKDQRPVSPVTSHLSMKSDFSMDHPVNLSDGTGTFDPRI
SNQTQRPVSPVTSHLSMKSDFSMDHPVNLSDGRGTFDPRGVKRTQRPVSPVTSHLSMKSD
FSMDHPVNLSDVTGTFDPRLVATSRLSKGENQGAACSLPEDQSSCAVCHQVQRDLVSITC
GHRFCRQCITRYWEKPAPSGDYDCPQCRKKSRTLPVHLSEPNDARGSENMDDSLQRAIVN
HKDSLTRRYECVKEGMVKSGNQTSLNRIYTELYITEGESEGVNNEHEVWQLETASKTPTS
HDTAIHCNDIFKLLPGQERSIRTVLTKGIAGIGKTVSVQKFILDWAEGKANQDVDIIFVL
PFRELNVIKDLQYSLLGLLNYFHTELDIGNAKKLTACKSMFILDGLDESRFPLDFQHNEK
VSDVTXTSSVDVLLTNLIKGNLLPSALLWITTRPAAANQISSGCVDQVTEVRGFNDLQKE
EYFRKRFSDEDLASRIISHIKTSRSLHIMCHIPVFCWISATVLEHMLSTDKSREMPTTLT
EMSIHFLLIQTSLKNQKYHGRDEMDQEELMESDKDILLKLGKLAFEHLEKGNLMFYEEDL
KECGIDVKEASVYSGLCTQIFKEESVFFQRVVYCFVHLSIQEFLSAVYIYHCYTTKNMDA
LKPFLKRKSRAASEELTLHELLKSAVDKALESKNGHLDLFVCFLHGMSLESNQKLLRGLV
TQTESTPECVKKTIRSLKVMQRKNISPERCINLFHCLIEMKDQSVQEEIREYLTSEDRSK
NLSLAHCSALAYTLQISEVVLDVFDLKEYKTSEEGRRRLLPAVRGCRKALLTGCKLTDTS
CEVLLSVLISNPSHLRELDLSNNDLKDSGVKLLSAGLGNPNCKLETLRLSGCLVTEEGCS
SLVSALRSNPSHLRELDLSYNHPGDSGVRLLSAGLEDPHCRLEKLNVDHGGEYTMKPGLR
KYACDLTLDPNTVNRLLSLSEENRKVTWRTEEQPYPDHPERFDGWKQVLCREGLTGRCYW
EVEWSGRRSGIGVTYKGISRRGGKDCVIGLNDKSWSLFCSDNRYYAWHNDNPTTIDISSS
SSHRVGVYLDWPAGTLSFYRVSSDTLTHLHTFYTTFTEPLYPGFRVCCDSSVTM
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgaaattctgtagagagaggaagggggcactgcctctggataaagtgtggttggaggca
catcacaaggaccaaagaccagtctctccagtaaccagtcatctgtccatgaagagtgac
ttctctatggaccatcctgttaatttgagtgatggaacaggaacctttgaccccagaatc
tccaaccaaactcagagaccagtctctccagtaaccagtcatctgtccatgaagagtgac
ttctctatggaccatcctgttaatttgagtgatggaagaggaacctttgaccccagaggt
gtcaaaaggactcagagaccagtctctccagtaaccagtcatctgtccatgaagagtgac
ttctctatggaccatcctgttaatttgagtgatgtaacaggaacctttgaccccaggttg
gtagcaacatcaaggctgtcgaaaggagagaaccaaggtgcagcgtgctctctgccagag
gatcagtccagttgtgcagtgtgtcaccaggtgcagagggatctagtctctatcacctgt
ggacacaggttctgcagacagtgcatcaccagatactgggagaaacctgctccttcagga
gactatgactgtcctcagtgtagaaagaaatccagaacacttcctgtgcacctgagtgaa
cccaatgatgcaagaggctctgaaaatatggatgacagcctacagagagccatagtaaac
cacaaagacagtctgacaaggaggtatgaatgtgtgaaagaaggcatggtaaaatcaggg
aatcaaacttcgctcaacaggatttacacagagctctacatcacagaaggagagagtgaa
ggggttaacaatgaacatgaggtgtggcagcttgagacagcatccaagacaccaacctca
catgacacagcaatccactgcaatgacatctttaaactcttacctggccaggagagaagc
atcagaactgtgctgacgaagggcatcgctggcatcggaaaaactgtctctgtgcagaag
ttcatcctagactgggctgaagggaaggcaaatcaagatgtggatatcatatttgtgctt
ccttttcgggagctgaacgtgatcaaagatctccagtacagtctgcttggacttctaaat
tatttccacacagaactagacataggcaatgcaaagaaactcactgcctgtaaatctatg
ttcatcttggatggtttggatgaaagcagatttccattggatttccagcacaacgaaaag
gtgtctgatgtcacanngacatcgtctgttgatgttctgttgacaaacctgatcaagggg
aatctgcttccctctgctctcctttggataactactcgacctgcagcagccaatcagatt
tcttcggggtgtgttgaccaggtgacagaggtacgagggtttaatgacctacagaaggag
gagtacttcaggaagagattcagtgatgaggacctggccagcagaatcatctcacacata
aagacatcaaggagcctccacatcatgtgccacattccagtcttctgttggatttctgca
acagtccttgaacacatgttgagtacagacaagagcagagagatgcccacgactctgact
gagatgtccatacacttcctgctcattcagaccagcctgaagaaccagaagtatcatgga
agagatgagatggatcaagaggagctcatggagtcagataaggacattcttctgaagctg
gggaagctggcgtttgaacatctggagaagggtaatctcatgttctatgaagaagacctg
aaagagtgtggcattgatgtcaaagaagcctcagtgtactcaggattgtgcacacaaatc
tttaaagaggagtctgtgttctttcagagagtggtgtactgctttgttcatctgagcatt
caggagtttctctcggctgtctacatataccattgttacacaaccaagaacatggatgca
ctgaagcccttcctcaagagaaagtctagagctgcgtctgaagagctaaccttgcatgag
ctgctgaagagtgctgtggataaagccttggagagtaagaatggacacctggaccttttt
gtctgcttccttcatggcatgtcactggagtccaatcagaaactcctacgaggtctggtg
acacagacagaaagcactccagagtgcgtcaagaaaacgatccgatcccttaaggtgatg
cagaggaagaacatctcccctgagaggtgcatcaatctctttcactgtctgatagagatg
aaagaccagtcagtacaggaggaaatccgtgagtatttgacgtcagaggacagatccaaa
aacctctcccttgctcactgttcagcgctggcctacacgctgcagatatcagaggtggtt
ctggatgtgtttgacctgaaggaatacaagacgtcagaggagggtcgtaggagactgctc
ccagctgttagaggctgcaggaaagctctactcactggctgtaaactcacagacacatcc
tgtgaagtgttgctctcagttctcatctcaaacccctcacacctgagagagctggatctg
agcaacaatgacctgaaggattcaggagtgaagctgctctctgctggactggggaatccc
aactgtaaactggagactctgaggctgtcaggctgtctagtcacagaggaaggctgttct
tctctggtctcagctctgaggtcaaacccctcacacctgagagagctggacctgagctac
aatcacccaggagactcaggagtcagactgctctctgctggactggaggatccacactgc
aggctggagaaactcaatgtggatcatggtggagagtacacaatgaaacctggccttaga
aaatatgcctgtgatctcacactggacccaaacacagtaaacagactcctctctctgtct
gaggagaacagaaaggtgacatggaggacagaggagcagccgtatcctgatcacccagag
agatttgatggctggaagcaggtgctctgtagagagggtctgactgggcgctgttactgg
gaggtagagtggagtgggagacggtctggaataggagtgacatataaaggaatcagcagg
agagggggtaaggactgtgtgattggattaaatgacaagtcctggagtctgttctgttct
gacaacaggtactatgcctggcacaatgataatcccactaccatagacatctcctcctcc
agctcccacagagtaggagtgtatctggactggccagccggcactctgtccttctacaga
gtctcctctgacacactgacccacctgcacacattctacaccacattcactgagcccctc
tatccagggtttagggtttgttgtgactcctcagtgaccatgtaa
DBGET
integrated database retrieval system
