KEGG   Oncorhynchus mykiss (rainbow trout): 110487525
Entry
110487525         CDS       T07259                                 
Name
(RefSeq) ubiquilin-4
  KO
K04523  ubiquilin
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    110487525
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110487525
   03051 Proteasome [BR:omy03051]
    110487525
Membrane trafficking [BR:omy04131]
 Autophagy
  Chaperone mediated autophagy (CMA)
   Selective cargos
    110487525
Proteasome [BR:omy03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    110487525
SSDB
Motif
Pfam: UBQLN1 ubiquitin STI1-HOP_DP Rad60-SLD UBA Ubiquitin_5 UBA_7 YukD Rad60-SLD_2 UBA_HOIP Dsc3_N UN_NPL4 CUE UBA_NBR1_C MUCL1
Other DBs
NCBI-GeneID: 110487525
NCBI-ProteinID: XP_021415120
Ensembl: ENSOMYG00000000958
LinkDB
Position
2:complement(33020821..33027137)
AA seq 590 aa
MAENSGTDPTVDSNVVENAASDGTMIVVTVKTPKDKEEIAISEDSSVAQFKEEISKRFNA
KKDQLVLIFAGKILKDGDTLNQHGIKDGLTVHLVIKTAPKTTVGGTSQSSASSSGTPQAE
SSINPSAVPNASTTPGTGPTPASTQPPNLLSGFGDLSSLSGMGMGSANFMEMQQQMQRQL
MSNPEMLSQIMDNPLVQNMMSNPDLMRQMIVTNPQMQQLMERNPEISHMLNNPELMRQTM
ELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMFSAAREQFGNNPFSAL
GGNLDSGVQPSRTENREPLPNPWGPPGTSPSESRGTGASTTTTSSAGGTAPSASNPLGIN
TSGLGNGVFGSPGMQSLMQQISENPQLMQNMLSAPYMRSMMQSLAQNPELASQAMLNNPL
FAGNTQLQEQLRHQMPVFLQQMQNPESLSVMTNPRAMQALMQIQQGLQTLQTEAPGLMPS
LAPGEIPVIPPTTGGSVAPENLPPPTQGSNPTAATNPSQQQQQLMQQMLQMFAGGGGGSL
TLTPEVRFQQQLDQLSAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq 1773 nt   +upstreamnt  +downstreamnt
atggcggagaacagcggcacagatcccactgtggattccaacgtcgttgaaaatgctgcc
tcagacgggaccatgatcgtggtcacggtaaaaactccgaaagataaagaggagatagcg
atctcggaggattcttctgtcgcacagtttaaagaggagatatccaaaaggtttaatgcc
aagaaggaccagctggtgttgatttttgctggcaaaatcttaaaggatggagacacactg
aaccaacacggcatcaaggacggactcactgttcaccttgtcatcaagactgctcccaag
accacagttggtggcacatcccagtcctctgcatccagctctgggaccccccaggccgaa
agcagcatcaatcctagcgcagtgcccaatgccagcacaacaccaggcactgggcctacc
ccagcctccacacagccacccaacttactcagtgggtttggtgacctatctagcctgtca
ggcatgggcatgggctcagccaacttcatggagatgcagcagcagatgcagagacagctg
atgtccaacccggagatgctgtctcagatcatggacaaccctctggtgcagaacatgatg
tctaacccagacctgatgaggcagatgattgtgaccaaccctcagatgcagcagctgatg
gagcgtaaccctgagatctcccacatgctcaacaatcctgaacttatgagacagaccatg
gagttggcaaggaacccagccatgatgcaagagatgatgcgtaaccaggaccgggcgctt
agcaacctggagagcattcctgggggatacaacgccctccggaggatgtacacagacatc
caggagcctatgttcagtgccgctagagagcagtttggaaacaatcctttctctgctttg
gggggcaacttagactctggcgtgcagccctccagaacagagaacagggaacccttacca
aacccatggggaccccctggaacgtccccctcagaaagcagggggactggcgcctccaca
acaacaacctcctctgctggcgggactgcacccagtgcctccaaccccctgggcatcaac
acctctgggctgggcaatggtgtattcggtagccctggcatgcagagtctgatgcagcag
atctctgagaacccccagctcatgcagaacatgctgtctgcgccctacatgcgcagtatg
atgcagtcgctggcgcagaaccctgaactcgcctcgcaggcaatgctgaacaaccccctc
tttgccggaaacacacagttacaggaacagttgagacatcagatgccggtctttctccaa
cagatgcagaatcctgagtcactgtctgtgatgactaacccccgggccatgcaggctctc
atgcagatccagcagggcctgcagaccctacagacagaagcccccgggctcatgcccagt
ttggctcctggtgagatcccagtgattcctccaaccacaggaggcagtgtggccccagaa
aaccttcctcccccaacacagggctcaaatcccaccgctgccactaacccatcccagcaa
cagcagcagctcatgcagcagatgttacagatgtttgctgggggaggaggcggctcattg
actctaaccccggaggtgcggtttcagcagcaactggaccagctcagcgccatgggcttc
atcaaccgcgaggccaacctgcaggccctcatcgccacggggggagacatcaatgctgcc
attgagagactgctgggctcccagccctcctaa

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