Oncorhynchus mykiss (rainbow trout): 110487591
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Entry
110487591 CDS
T07259
Name
(RefSeq) tenascin-X
KO
K06252
tenascin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510
Focal adhesion
omy04512
ECM-receptor interaction
omy04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110487591
04518 Integrin signaling
110487591
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
110487591
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110487591
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110487591
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
Fibrinogen_C
EGF_Teneurin
fn3
EGF_2
EGF_Tenascin
hEGF
EGF
DUF7949
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_3rd
Fn3_PBP1
EGF_integrin
Big_5
Ig_J
PRR11_2nd
Motif
Other DBs
NCBI-GeneID:
110487591
NCBI-ProteinID:
XP_036827094
LinkDB
All DBs
Position
32:complement(32943096..32974388)
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AA seq
1142 aa
AA seq
DB search
MPLVPSFLILLLTCPALLTPSGSQGLQPGGQRAPRDTKPGGGGQPIKVVISEACVQGDSS
QTQGKELDLEPGSALVLTHRIRLVPGSCAGGCEAEFAALRDRLERLEKEVSSLREKCGGP
EGGCCTSQQSKGAECYIKPEGDECPNECSDQGRCEDGKCVCFPGFSGPDCSLSDCPGNCN
DKGKCVSGQCVCDPGFTGPDCSSESCPGNCNNKGRCVNGQCVCDPGFTGPDCSSESCPGN
CNNKGRCVNGQCVCDSGFTGPDCSSESCPGNCNNKGRCVNGQCVCDLGFTGPDCSSESCP
GNCNNKGRCVNGQCVCDSGFTGPDCSTKACPGNCKNGGKCVNGKCVCDSGFTGPDCSTKS
CPGNCSNRGKCVNGQCVCDSGFTGPDCSAKACPNNCSNKGRCVNGKCVCEVGFSGQDCAA
KGCPNNCSNKGRCVKGRCVCRRGFAPPDCSQCEAGFTGADCGTAMSGVSQLNTKDITESS
VTLYWTPPPVQYDTYHVTFASQKEGDQQITSQVGGKLTTYTQTGLAAGQEYTVTIKGEIN
RRMGTESTVEFTTLISGPTNLRVVKTTTTSAVVQWEQSQGHVDRYRLTVAPNQTDGTAKG
RQDLTLPPERDSAQIDGLDPGHLYDITLVAEKGGIKSKPTTVQVTPGPEPPSGLVFSEVT
ETSFSVSWTKPKGPVSGFKVTYTNTQEGEPLSATVDSGDSTLALSKLSPGSSYEVSVISV
LGLDESDAIKDLVMTLPDPPRDLRAINVTDTKALLLWRPALATVDRYVIVYGSEKGSDDA
KITVSGNAAEQQLKGLQGSTRYTVTVTSQLGNLDSSAAITVFTTTGGSRGDGEVPRDLKA
SQVTPRSALLTWKAPSAAVGSYKLTYQTEGQELQEVTIDSTVTEFKLTRLHPMSKYTVHL
QGERGGSYTATISTEFTTGNLRYPFPSDCSQELLNGIHESGEVEIFPRGRQGKPVLVYCD
QVTDGGGWTVFQRRMDGKTDFFRGWKNYSKGFGELSGEFWLGNENLHNLTSMAPMTLRVD
LRAGDESVFAKYSAFTVDTVRRNYALKVSGYSGTAGDSMSYHNARMFSTRDRDPAPFITR
CAMSYRGGWWYKNCHEANLNGLYDTSVNHQGVIWTAWKGKDLSIPFTEMKLRPTSFTPPT
QG
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtcccatccttcctcatcctgctcctcacctgccctgccctcctgacccca
tcaggttcccagggcctgcagcctgggggtcaaagggcacccagggacacaaagccaggg
ggtggcgggcagccaatcaaagtagtgatctctgaggcgtgtgttcagggggactccagt
cagacccagggcaaggaactggaccttgagcctggttctgctctagtccttacccatcgg
atccgactggttccggggtcatgcgcaggcgggtgcgaggccgagtttgctgccctgcga
gaccgtctggagaggctggagaaggaggtgtcatcattgagggagaagtgtggaggtcca
gaggggggctgctgcacgtcccagcagagtaaaggtgcagagtgctacatcaagccggaa
ggagacgagtgtcctaatgagtgcagtgaccagggacgctgtgaagatggcaagtgtgtc
tgcttcccagggttcagtgggcccgactgcagtttgtctgactgccccggcaactgcaat
gacaaggggaagtgtgtgagcggccagtgtgtgtgcgacccaggtttcacagggccagac
tgctcttcagagtcctgtcctggaaactgtaacaacaagggccgatgtgtgaacgggcag
tgtgtgtgcgacccaggtttcacagggccagactgctcttcagagtcctgtcctggaaac
tgtaacaacaagggccgatgtgtgaacgggcagtgtgtgtgcgactcaggtttcacgggg
ccagactgttcttcagagtcctgtcctggaaactgcaacaacaaggggcgatgtgtgaac
gggcagtgtgtgtgcgacctaggtttcacagggccagactgctcttcagagtcctgtcct
ggaaactgcaacaacaaggggcgatgtgtgaacgggcagtgtgtgtgcgactcaggtttc
acagggccagactgctccaccaaggcatgtcctggaaactgcaaaaacggggggaaatgt
gtgaacggtaagtgtgtgtgtgatagcggttttacaggcccagactgttccaccaagtcc
tgccctggcaactgcagcaaccgtggaaagtgtgtgaacggccaatgtgtctgcgatagc
ggctttacggggccggactgttccgccaaagcatgtcccaataactgcagcaacaaggga
aggtgcgtgaacgggaagtgcgtgtgtgaagtgggcttcagcggacaggactgcgccgct
aagggctgtcccaataactgcagcaacaaagggcgctgcgtgaaggggaggtgtgtgtgt
cgccgtggtttcgcccccccggactgcagccagtgtgaagctgggttcactggagctgac
tgtggcaccgccatgtctggtgtgtcccagctcaacaccaaggacatcactgaatcctct
gttaccctctactggacaccacctccagtccagtatgacacctaccacgtcaccttcgcc
agccagaaagagggcgatcaacagataacatctcaagttggagggaagctcacgacctac
acccaaacaggactggcggccgggcaggagtacacggtgacaatcaagggagaaataaat
aggagaatgggcaccgagagcacagtagaattcacaacccttatctctggacccacaaac
cttcgagttgtgaagacaaccacaacatctgcagttgtccaatgggaacaatcgcaagga
cacgtcgacaggtatcgcttaactgttgcacccaatcagacagacggaacagccaaggga
agacaagacctgaccctgccccctgagagggactctgcccagattgacggtttggacccg
ggacatttgtatgacatcacactagtggctgaaaagggcgggatcaagagcaagccaaca
acagtccaagtcactcctggtccagagcctccctcaggtcttgtcttcagtgaagtgact
gagacgtctttctccgtgtcctggaccaagccaaaaggtcccgtgagtggcttcaaggtc
acctacactaacacacaggaaggggagcctctctccgcaacggtggactctggggattcc
actctggcactgtcaaagctctctccagggtcctcctatgaggtcagtgtgatatccgtc
cttggactggacgagagcgatgcaatcaaagacctggttatgacactccctgaccctccg
agggatctccgggccattaatgtcacagacaccaaggccttgctgctatggcgaccagca
ctggcaacagtcgaccgttacgtcatagtttatggctctgaaaaagggtcagatgatgcc
aagatcactgtatcgggcaatgcggcggagcagcagctgaaaggcctgcagggctccact
aggtacaccgtcacagtcaccagtcagctgggcaacctggacagctctgccgccatcacc
gtcttcaccaccaccggtggatccaggggagacggggaagttccgcgtgacctgaaggcc
agtcaggtgactcctcgctcagcgctgttgacgtggaaagcaccctctgccgccgtggga
agctacaagctgacctatcaaacggagggacaggagttgcaggaggttaccattgactcc
acagtaacagagttcaaattgaccaggctgcatcccatgtccaagtacaccgtgcatcta
cagggggagaggggagggagctatactgctacaatttccactgagttcaccacagggaat
ctccgataccccttcccaagtgactgttcccaggagctgctaaacgggatacacgagtct
ggagaggtggagatcttccccaggggaaggcagggaaaaccagtgttggtctactgcgac
caggtgactgatggaggtggctggacggttttccagagaaggatggatgggaaaacggac
ttcttcagaggctggaaaaactacagcaaaggttttggagaactgagtggggaattttgg
ctgggcaatgagaacctacacaatctaaccagcatggcaccaatgaccctacgtgtggac
ctccgtgcaggggacgaatcagtgtttgccaagtactctgcattcacagtggatactgtt
agaaggaactatgctctcaaagtgtctgggtacagcggtacagcaggtgactctatgagt
taccacaacgcgcgcatgttctctaccagagacagagaccccgcgcctttcatcacccgc
tgcgccatgtcctacagggggggttggtggtacaagaactgccacgaggccaaccttaat
ggcctctacgacaccagtgtcaatcaccagggtgtgatctggactgcctggaaaggcaag
gacttgtccatccctttcaccgagatgaagctccgaccaacatctttcacccctccaact
cagggataa
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