KEGG   Oncorhynchus mykiss (rainbow trout): 110487670
Entry
110487670         CDS       T07259                                 
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013  Nucleocytoplasmic transport
omy03015  mRNA surveillance pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110487670 (rbm8a)
  09122 Translation
   03013 Nucleocytoplasmic transport
    110487670 (rbm8a)
   03015 mRNA surveillance pathway
    110487670 (rbm8a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110487670 (rbm8a)
   03041 Spliceosome [BR:omy03041]
    110487670 (rbm8a)
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     110487670 (rbm8a)
Spliceosome [BR:omy03041]
 Complex C
  Other components
   EJC/TREX
    110487670 (rbm8a)
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 110487670
NCBI-ProteinID: XP_021415265
Ensembl: ENSOMYG00000001267
LinkDB
Position
2:complement(33400775..33404514)
AA seq 175 aa
MADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAKRRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDIHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQDMMGQPISVDWGFVRGPPKSKRRGGGRRRSRSPDRRRR
NT seq 528 nt   +upstreamnt  +downstreamnt
atggctgacgtactagatcttcatgaagcgggaggcgaggactttgctatggatgaggat
ggtgatgacagcatccacaagttaaaagagaaggcaaagaggagaaagggtcgaggtttt
ggttcagaggagggagcaaggtccagagtgagagaggactatgataccgtggagcaggat
ggtgatgagccaggtcctcagagatctgtggagggttggatcctttttgtgactggggta
catgaagaggccactgaggaggacatccacgacaagtttgcggagtttggagagatcaag
aacctacatctgaacctggaccgaagaacaggttacctcaagggttatgcgctggtggag
tatgagacatacaaagaagcccaggcagccatggaagggttgaatggccaggacatgatg
ggccagcctatcagtgtggactggggcttcgtcagaggaccacccaagagcaagaggagg
ggtggtggacgtagacgcagcaggagtccagacaggagacgacgttga

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