Oncorhynchus mykiss (rainbow trout): 110487766
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Entry
110487766 CDS
T07259
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2 isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04810
Regulation of actin cytoskeleton
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
110487766
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110487766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110487766
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
110487766
Factors involved in mRNA localization
Other mRNA localization factors
110487766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
110487766
NCBI-ProteinID:
XP_036799143
Ensembl:
ENSOMYG00000011670
LinkDB
All DBs
Position
14:28157062..28221237
Genome browser
AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgaccctggaggatgctctgtctaatgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccaccttcatccatcatgtaccaggct
aacttcgacacaaactttgaggacaggaatgcgtttgtgacggggatagctcgctatatc
gagcaggctactgtccactctagtatgaatgagatgctggaggagggccatgagtacgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaacgaa
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaagactttgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagc
gtcaagaacgaccactctgcctataaaagggcggctcagttcctgaggaagatggctgac
cctcagtccatccaggagtcacagaacctctccatgttcctagccaatcacaacaggatc
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaagatgtacctgacgcccagtgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagattgacaaattcttcaag
ctgcaggtggtgcctctgtttggagacatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtataacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggtctggacagtcagaaa
tcagatgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcatggaagttggtccacccgacagataag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagggagcctctacgtcaggccgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcaatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccctgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
actcacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagttgaccatgggtcgcaggatccagttccccatcgagatg
tccatgccctggattctcacagatcacattctggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacagttcctctacgatgagatcgaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagacgctgctcaaacagagacacgtacagctcctaggtcgctccatc
gatctgaaccgtctgatcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagtcgctttgagagtgaagacctcacctccattgtggagttggagtggctgatg
gacatcaacagactgactcatcgtctgctttcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaacgtgtctgccccctacggacgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgtgcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcccacatctat
agctcctacaggaacttcgtaggcccgccccacttcaaaaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggaactgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaagtgatgcccaagatctgtcgcctg
ccgcgccacgagtacggatccccaggtatccttgagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagactgacgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
attgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacgaggatccgtagt
ttcctgcaggacgctgtgtggcgaggcccgccccccaccaatggcgtgatgcacgtggac
gagtgtatggagtttcaccgcctttggagcgccatgcagtttgtttactgcatccccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgatgggctgaactgggcaggctgc
tccatcatcgtgctgttgggtcagcagcgccgcttcgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacggcaaggatgagatcatcaagaacgtgccgctgaag
aagatggctgatcggatcaggaagtaccagatcctgaacaatgagatctttgccatcctt
aacaagtacatgaaggctgtggagactgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacgtgctga
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integrated database retrieval system
