Oncorhynchus mykiss (rainbow trout): 110487769
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Entry
110487769 CDS
T07259
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 2
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110487769
Membrane trafficking [BR:
omy04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
110487769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
SH3_9
TPR_8
TPR_2
SH3_2
SH3_1
DUF4939
TPR_10
Motif
Other DBs
NCBI-GeneID:
110487769
NCBI-ProteinID:
XP_036799537
LinkDB
All DBs
Position
14:30288746..30392033
Genome browser
AA seq
1707 aa
AA seq
DB search
MTNEVTGENRQQDRDISPAELDALWREPPYTLAGTNEHFPGNDVMNPGVEGLGVESGGGE
AEPYSYWKRKEEFTRGSTVSLAVGERFSSDVVLVFSGWRRSGVIPDTELQEALRTRLRVV
ESNSQDVIQLFKDLSARLLSVHAEKDSFVITFKTVEEMWKFSTYLALGYVARCLENFLCD
QSFWLDTELLRDLEITVTVDEEHLATLYLGLLLQEGSFFAKALVSSGEHSDEEEELCFRR
NDLLMVRDTGQDSHWEGTLLSTGQHGLVPVNNMQPLPYPFYQWFLRKYPGCAGCSPSERG
QFDHPIVTGSCEAVVDHNPVGYDELQLSRGDLIEIQGMLLRGLDLFIGTHCSTGNTGFVH
KAHVKPLNAKPLDGQLVFLSEEERASLSQVNPCSTEPRDSDLLERLFSSDISTVYRLDRL
DQSDFTYIRNQPKQEHKPPTSSRQSIISEKSDATLPYHFSYASQNALGRGSDGELLSFSL
DDTFREMNEFQDDPTLFLEEGEESEVCDPTLTLLNMHHFQEDFLPLYDLHHSFLWLTFSG
QSEEELLGHLEIVREGAKRTGMDWAHRRACFLLGRLCAKKLKYSQARVYYEEALGVSVDG
FSDLPLLIALYTNLTAIYLKQKMADKLPPTLEKASALLLCLPNHSFTSLDEFELLKLVLR
RSVVEGDKHLEARACYLTASLFLLLRKIDDALPFAERLQFLTVTLSAEEGRPIAPLDLNW
LLSRLYNRKYMPYLALASLSLDTGHDHSLQDAFHRIELFSRNSVRLNPRWKEGTSLLPAQ
IVVYLQQALAIAERGDDLKTQRDLCLGLACVYQQHGALEKALLCAQQAVQTGGGINEEEG
FEASVLLGWLLVLTGQPERAQNTLQPLLQSLQGTDSPTQRGVIHNLLALCLRQQGGIPEA
GSHLHYALTISRESGNQRNQALALANLGCLALGVGAPTLAERFLFRSLWLFLEIWESPVD
EEHVQTYLWLGRSYKDRGRSQDARLCYEMGLLISLQARNLPSQMVVAKVLSRHYADVLLY
GQSILYYEHCVSVSRDLKDKRLEGEYLEILSSLYLSLNTEKSSRKSLDYSKQSLRISIDL
GKREEESETWLQVGRIYYLIHEDELADMYLQAAVKTALRMNDPRFAMSIYEEAGDVFFKG
NRNRLASLPFYRDGSLPFARSIRDIDSEFRLLSKLTELLMTQEEHEEALQYAILAVQIST
KTGVCVNERAAYHRLATVYYSLEQYEMTENYYLKSLSLSPAVLQHPLEARYYTKLYCRLG
DLTLHKLKDAYDSMGYFQLAQAAALEDRANPQALYVVYMKLAEIHANHMPDPLLCQAYRD
RAQSLRRELSGLGETDGRGGMAEGRGREMEGPQNYIHYCLLVRTQYYIHHWLLVRTQNYI
HYCLLVRTQYYIHHWLLVRTQNYIHYCLLVRTQYYIHHWLLVRTKNYIHYCLLVRPQNYN
HYWLLNYIHYCLLVRPQYYIHYCLLVRPHNYIHHCLLVRTQNYIHYCLLVRTQNYIHYCL
LVRPQNYIHYCLLVRTQNYIHYCLLVRTQYYIHYCLPVRTQNYNHYCLLVRTQNYIHYCL
PVRTQNYNHYCLLVRTQNYIHYCLLLEQLGTAMKEVLHILHCLDTTREAIHTSYRGPPTT
GHHSEPLPHPTQPSTQVSDAQLSLLEKYDSTPSRSPGLLLQCSRYFAYQMGAPTTKRSKI
ATVISLLTGRALEWTMAIWERGRAEFL
NT seq
5124 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatgaagtgacaggagagaacagacagcaggacagagacatctcccctgctgag
ctggatgcactatggagagaaccaccgtacacgctagcgggaaccaatgagcacttccca
ggaaatgatgttatgaatccaggggtggaagggctgggggtggagtctgggggtggggag
gcggagccgtacagttactggaagaggaaggaggagttcaccagaggaagcaccgtgtca
ctggccgtgggagagaggttctcctcagacgtggtgctggtgttcagcggttggcggcgc
tcaggtgtaatacctgacactgaactacaggaggcgctccgtaccagactcagggtcgtc
gagagcaacagtcaggatgtcatccagctcttcaaggacctgtctgcccgtctgctgtct
gtccacgctgagaaggacagctttgtcatcaccttcaagactgtggaggagatgtggaag
ttctctacctacctggctctgggctatgtggcgcggtgcctggagaatttcctgtgtgac
cagtcgttctggctggacactgagctgctgagggacttggagatcactgtgactgtagac
gaggaacacctggcaacactctacctgggactgctgctgcaggaggggtcgttctttgcc
aaggcgctggtgagcagtggtgagcacagtgatgaggaggaggagctgtgtttcagacga
aatgacttgctgatggttagagacacggggcaggacagtcactgggagggcacccttctc
tccaccggacaacacggactagtgcctgtcaacaacatgcaaccgctgccataccccttt
taccagtggttcctgaggaagtaccctggctgtgctggatgctccccttcagagagagga
cagtttgaccaccctatagtaactggttcctgtgaggctgtagtggaccataacccagta
ggatatgatgagctccagctgagtcgaggtgacctgattgagatacaggggatgctactc
cgaggtctggacctgttcataggaacacactgctctacaggaaacaccggcttcgtacac
aaggctcacgtgaagccactcaacgccaaaccactagatggacaacttgtgtttctgagt
gaggaggaacgtgcgtctctgtcccaggttaacccctgtagtactgagcccagagacagt
gacctcctagagagactcttctcctctgacatcagtactgtctacagactagacagactg
gatcagtctgactttacgtacatcagaaaccaacctaaacaagaacataagccccccacc
agtagccggcagtccatcatctcagagaagagtgacgctacactcccataccacttctcc
tacgcatcccagaatgctttagggcgtggcagtgacggggagctgctgtccttcagtctg
gacgacaccttcagagagatgaacgagttccaggatgacccaacccttttcctggaggag
ggggaggagtcggaggtctgtgaccccaccttgaccctgctcaacatgcatcactttcag
gaggacttcctgcccctttatgacctccaccactcattcctgtggctgacgttctcaggg
cagagtgaggaggagttactgggccacctggagattgtcagggagggggccaagagaacg
ggcatggactgggcacaccgacgggcatgcttcctactggggaggctctgcgccaagaag
ctcaagtactcccaggcccgtgtgtattacgaggaagcccttggagtctccgtcgacggt
ttctctgacctccctctcctcatcgccctgtacaccaacctcacagccatctacctcaaa
cagaagatggccgacaagctgcccccgaccctggagaaggccagtgctctgctcctctgc
ctccccaaccacagcttcacctccctggatgagtttgagctgctgaagctggtgctgcgg
aggtctgtggtggaaggggacaaacacctggaggcacgggcctgctatctcaccgccagc
ctcttcctcctccttagaaagatagatgatgccctgcccttcgcagagcgtctccagttc
ctcaccgttaccctgtctgctgaggaggggcgccccatcgcccccctggacctcaactgg
cttctgtcccgtctctacaaccgtaaatacatgccctacctggccctggcatcactcagc
ctggacactggacatgatcactcactacaggatgccttccacaggatagaactgttcagc
aggaactcggtgcgtctgaacccgcgatggaaagaggggacgtctcttctcccagcccag
atcgtggtgtacctgcagcaggctctggcaattgcggagcggggtgacgaccttaagacc
cagagagacctatgtctgggcctggcctgtgtttaccagcaacacggggccctggagaag
gccctgctctgtgcccagcaggctgtacagaccgggggaggtatcaacgaggaggagggg
tttgaggcgtcagtactgctgggatggctgttagtcttgacgggacagcctgagagggca
cagaacaccttgcagccactattacagtctctacagggaaccgacagcccgacccagagg
ggagtgatccacaacctgctggctctgtgtctgcggcagcagggtggcatccccgaagct
ggcagccacctccactatgccctcaccatctccagggagagtggcaaccagaggaaccag
gccctggccctcgccaacctgggctgcctggcactgggcgtgggggcacccacactggca
gaacgattcctattcaggtctctgtggttgttcctggagatctgggagagtcccgttgac
gaggaacacgtccagacctacctatggttggggcggagctacaaggacagggggaggagc
caggatgccaggctgtgttatgagatgggcctcctcatctccctccaggccaggaatcta
cccagtcagatggtggtggctaaagtcctgagtcgtcactatgctgacgtgctgctgtat
ggacagagtatcctctactatgagcactgtgtgtctgtgtccagggacctgaaggacaag
agactagagggagaatatctagagatcctcagtagcctctatctgtccctcaatactgag
aaatcatcaaggaagtctcttgactacagtaagcagagtctgcgtatctccatcgacctg
gggaagagagaggaagagtcagagacctggcttcaggtgggacgcatctactacctcatc
catgaagacgaactggctgacatgtacctacaggcggcagtgaagacagccctgaggatg
aacgacccacgctttgccatgagtatctacgaggaggcaggagacgtcttcttcaaaggc
aacaggaacagactggcgtcactgcccttctacagggacggcagtctcccttttgctcgg
agtatccgtgacatcgactcagagttcagactgctgagtaaactgactgaactgctgatg
acccaggaagaacatgaagaggctctacagtacgccattctggctgtacagatcagcacc
aaaacaggtgtgtgtgtgaacgagcgcgcagcgtaccaccgtctggctacagtgtactac
agtctggagcagtatgagatgacagagaactactacctcaagtctctgtctctcagccct
gctgtactgcagcaccccctggaggctagatactacaccaagctctactgcaggctgggg
gacctgaccctgcacaaactaaaggatgcctatgactcgatgggctactttcagcttgct
caggctgctgccctggaggaccgtgccaacccacaggcactgtatgtggtctacatgaag
ctggcagagatccatgccaaccacatgccagacccactgctctgccaggcttacagggac
agggcacagagcctgaggagggaactctctgggctaggagagacggatgggaggggagga
atggcagaggggaggggacgagagatggaggggccccagaactacatccactactgtcta
ctggtcaggacccagtactacatccaccactggctactggtcaggacccagaactacatc
cactactgtctactggtcaggacccagtactacatccaccactggctactggtcaggacc
cagaactacatccactactgtctactggtcaggacccagtactacatccaccactggcta
ctggtcaggaccaagaactacatccactactgtctactggtcaggccccagaactacaac
cactactggctactgaactacatccactactgtctactggtcaggccccagtactacatc
cactactgtctactggtcaggccacataactacatccaccactgtctactggttaggacc
cagaactacatccactactgtctactggtcaggacccagaactacattcactactgtcta
ctggtcaggccccagaactacatacactactgtctactggtcaggacccagaactacatc
cactactgtctactggtcaggacccagtactacatccactactgtctaccggtcaggacc
cagaactacaaccactactgtctactggtcaggacccagaactacatccactactgtcta
ccggtcaggacccagaactacaaccactactgtctactggtcaggacccagaactacata
cactactgtctactgctggagcaactgggtacggccatgaaggaggtcctccacattctc
cattgccttgacaccaccagagaggctatccatacctcttacagagggcctccaaccacg
ggtcatcacagtgagccattacctcatcctacccagccgtccacccaggtcagcgatgcc
caactgtcccttctggagaagtatgacagtactcccagcagaagccctggcttgctactc
cagtgctcccgctatttcgcctatcagatgggagcccccactaccaagaggtccaagatt
gccacggtcatttccctgctgaccggacgggcgttggagtggactatggccatctgggag
agaggaagagctgagttcctatga
DBGET
integrated database retrieval system
