Oncorhynchus mykiss (rainbow trout): 110487800
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Entry
110487800 CDS
T07259
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110487800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110487800
03036 Chromosome and associated proteins [BR:
omy03036
]
110487800
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110487800
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
110487800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
110487800
NCBI-ProteinID:
XP_036799545
LinkDB
All DBs
Position
14:41725330..41830078
Genome browser
AA seq
2353 aa
AA seq
DB search
MSKASAESTDQVMEEEVGQLPITDQMEEDEEEEEAGSSTETERPSSSHTKRKPSVAAKQV
GGNESDTSDESGQDDGASDGMLVVRPPAGTDKEDKSRGAMKLRVDLSRRKTGKMSKASAE
STDQVMEEEVGQLPITDQMEDEEEEAGSSTETERPSSSHTKRKPSVAAKQVGGNESDTSD
ESGQDDGASDGMLVVRPPAGTDNKEDKSRGAMKLRVDLSRRKTGKMSKASAESTDQVMEE
EVGQLPITDQMEEAEDEEEEAGSSTETVRPSSSHTKRKPSVAAKQVGGNESDTSDESGQD
DGASDGMLVVRPPAGTDNKEDKSRGAMKLRVDLSRRKTDTTLQERIDCTACGQQVNHFQR
HSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKC
ILRNLGRKELSMITDEDSKWSCYICSPQPLSDIASNCSNILTKLESFWRTGRKKEREEKE
RKEVKGHSKGKGHHHHGKAVVNGKEHSDGSGTLTFSYKTLKVPKELVKRTKKLIETTTGL
NSTFIHFIQQAEEEQGAGEGGSGTRHRHLKAFRSVLADLKKAHAALEKDLESQFTSQDQG
MQNGDAVSNTDGHDGHDQIDNGQEAEEDKMADTEDGEEDGGVSEDTEMEGSPTPTPQDHS
ETGSQAKDQTVVKMEEEDGTEEEADRDKDIVSVGPSVPDELFQMVKSLADSTGLTPGNDA
TELTAASQSENPAAGSTRKSHDTQKEKAMPKVKNLILKLTPVPVVTTRASRSKSKDGEKE
RSKDGGKERSKDEGKERSKDGGKEKERSKDGGKEKERSKDENIDSEGEEKSPSKLKRRTK
GSSEKERGNTEERKESKASSMVTSDPSKQDVDSDSDEVPDILVQTAAAEHSSDEDVQQDA
DSNQGNKRARKCLFKLSKKEQVGEEEEEQVGEEEEEEQVGEEEEGEEQQVGEEEEQQVGE
EEEQQVGEEEEQVGEEEGENDKEKTDKKPAAKRKLKADDSDNSESDSDEDAKKKKKSSTA
SDKKTSKKKQKVSDGSSNSDLEKEMKGLSKLTTGKRRSSRVKKEREEKENKSGDRRRSYE
LKRKARSRGAKQQDSSSDDDDEEEEGGGSGEESGDQQKIKPIVEETVVAGRETFHQSSGE
EGNHDASQMAVDDDDDDPENRIAKKMLLAQIKANYSSGAEESSDEDGEEKEQRKGGEEEE
EEEEADDGEEEEEEEEGDSGSDMDVKKSGGRRHRLLRHKLTLSEGESGEEKEKPASKGKK
ETKRTRRKVGSDDSADLDSEESASSSESGVSEEISEEEEEESEEESEEGSSRRRTTRSSK
KKKKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIRKILKDD
KLRTETRDALKEEEERRRRIAEREQLREKLREVLVVEEASAVACPITTKLVLDEDEETKE
PMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTNKNSGSGCILAHCMGLGKTLQVVTL
LHTLLLCEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLEVTELATVKRPQERAS
ALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEGHILKNE
ASAISKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFVNPIQNG
QAADSTDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKHEYVVSVRVTPIQCTLY
RHYLEHLTGAGNVVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSM
DEFIASETEESSMSMTSEDEKQKKKKKRGKARKKDSDSDSDALEVIKEWNTSSRGGDPSS
RNRAEPEEEVRPASSPGTRSPDWHKEFVTEADSEILEHSGKMVLLFEILRMAEEVEDKVL
VFSQSLISLDLIEDFLELSGRAKEEEKQSPYKGEGKWFRNIDYYRLDGSTNALNRKKWAE
EFNDTSNVRGRLFLISTRAGSLGINLIGANRVIIFDASWNPSYDIQSIFRLYRFGQLKTC
YVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTELYAFEPDLLDDPTG
KKSKRTTPMLPKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEALSEEDRKAAWAEYEAE
KKGLSLRVNHGAYGGQMDMGGANSYFPFNVAALASMSNPQLEELINQGRQKVMEATNALK
FLPRESLEDTIGRVWKENPALTESQVQAMALGRQASVEMELKRREAVYRDVLNKQQTLMM
YVQKVITNRKVREQQMAMANQAQLMSQMNGMLGAGGMSQMELLGLYQQLGALQGHPTHPS
MGGKNPGPSKGNL
NT seq
7062 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggcctcagctgaatctacagaccaagtgatggaggaggaagtaggtcagctt
ccgattacagaccagatggaggaggacgaggaggaggaggaggctgggagctcaacagag
actgagagaccctcctcttctcacaccaagaggaagccttctgttgcagccaagcaagtt
ggagggaatgagtcagacacctcggacgagagtggacaggacgatggcgcctcagatggg
atgttggttgtgcggcctcctgctgggactgacaaggaggacaagagcagaggagccatg
aagctccgagtggacctctcacggagaaagacaggtaaaatgagtaaggcctcagctgaa
tctacagaccaagtgatggaggaggaagtaggtcagcttccgattacagaccagatggag
gacgaggaggaggaggctgggagctcaacagagactgagagaccctcctcttctcacacc
aagaggaagccttctgttgcagccaagcaagttggagggaatgagtcagacacctctgac
gagagtggacaggacgatggcgcctcagatgggatgttggttgtgcggcctcctgctggg
actgacaacaaggaggacaagagcagaggagccatgaagctccgagtggacctctcacgg
agaaagacaggtaaaatgagtaaggcctcagctgaatctacagaccaagtgatggaggag
gaagtaggtcagcttccgattacagaccagatggaggaggcggaggacgaggaggaggag
gctgggagctcaacagagactgtgagaccctcctcttctcacaccaagaggaagccttct
gttgcagccaagcaagttggagggaatgagtcagacacctcggacgagagtggacaggac
gatggcgcctcagatgggatgttggttgtgcggcctcctgctgggactgacaacaaggag
gacaagagcagaggagccatgaagctccgagtggacctctcacggagaaagacagatacc
actttgcaggagaggatagactgcaccgcctgtggacagcaggtcaaccacttccagcgc
cactcagtgtttgagcacccgatgctccatgtgctcctctgcaagtcgtgttataagtat
tacaccagcgatgacatcaataaagacgaggacggcatggacgaacagtgcaggtggtgt
gctgaaggtggcaacctgatctgctgtgactactgccacaacgccttctgtaagaagtgc
atcctgcgtaacctggggcgcaaggagctgtccatgatcaccgacgaggacagtaaatgg
tcttgctatatctgcagccctcagcctctctcagacatcgcctccaactgctccaacatc
ttgaccaagctggagagcttctggcgcactgggcgcaagaaagagagggaagagaaagag
aggaaggaggtgaaagggcacagtaagggtaaaggtcaccaccaccatggtaaagctgtg
gtgaacggtaaggaacattcagacgggtcagggaccctcaccttctcctataagaccctg
aaggtccccaaggagctggtgaagaggaccaagaagctgattgagacgaccacagggctc
aacagcacgttcatccatttcatccagcaggctgaggaggagcagggagcaggagaaggt
ggcagcgggaccagacacagacacctcaaggccttcaggtctgttctggctgatctgaag
aaggcccatgctgctctagagaaagacttggagtcacagttcacttcccaggaccagggg
atgcagaatggggatgctgtttcaaacaccgacggccatgacggccacgatcagatagac
aatgggcaagaggcagaagaggacaaaatggccgacactgaggatggggaggaggatggg
ggtgtgtcagaggacacagagatggaggggagccccacccccacgcctcaggaccactca
gagacaggcagccaggctaaagaccagacagtggtgaaaatggaggaggaggatggaaca
gaggaggaagctgaccgggataaagacatcgtgtccgtcgggccgtccgtccctgacgag
ctcttccagatggtcaagagtttagcggactccaccgggttaacgcccggtaacgacgcc
acggaactcacagcggctagccaatcggagaaccccgctgctggctcaaccaggaagtcg
catgacacccagaaggagaaggccatgcccaaggttaagaacctcatcttgaagctgacg
cctgttcctgtggttaccacacgcgcctccaggtctaagagtaaggatggagagaaggag
aggagtaaggatggagggaaggagaggagtaaggatgaagggaaggaaaggagtaaggat
ggagggaaggagaaggaaaggagtaaggatggagggaaggagaaggagaggagtaaggat
gagaacatcgactcagaaggcgaggagaagagcccaagcaagctgaagaggagaaccaag
ggcagctccgagaaagaacgggggaacacggaggagaggaaagagagcaaggcctcctcc
atggtaacctctgacccttcgaaacaggacgtggactcagattctgacgaggttccagac
atcctggtccagactgcagcggcggaacacagctcggacgaggatgtgcagcaggacgcc
gacagtaaccagggcaacaagcgcgccaggaagtgcctgttcaaactgagcaagaaagag
caggtgggagaggaggaggaggagcaggtgggagaggaggaggaggaggagcaggtggga
gaggaggaggagggggaggagcagcaggtgggagaggaggaggagcagcaggtgggagag
gaggaggagcagcaggtgggagaggaggaggagcaggtgggagaggaggagggagagaat
gacaaggagaagacggacaagaagccggcggccaaacgcaaactgaaagccgacgactcc
gacaactcagagtctgactccgatgaagacgcaaagaagaaaaagaagtcctccacggct
tctgacaagaagacatccaagaagaagcagaaggtctcggacggctcctccaactcggac
ctggagaaggagatgaagggactcagcaaactgacgacggggaaacggaggagcagccgt
gtgaagaaggaaagagaggagaaggagaacaagagcggagatcggaggcggtcgtacgaa
ctgaaacgcaaagccagaagtagaggagccaagcagcaagattcatcgtctgatgatgac
gacgaggaggaggagggaggagggtctggagaggagagtggagaccagcagaagattaaa
cccatcgtggaggagacggtggtagcagggagggaaaccttccaccagtcctcaggagag
gaaggtaaccatgacgcttctcagatggctgttgatgatgacgatgatgatccagaaaac
aggattgccaagaagatgctgctggcccagatcaaggccaactactcttcaggagcagag
gagagctctgacgaggatggagaagagaaggaacagaggaagggaggagaggaggaggag
gaggaggaggaggcagatgatggtgaggaagaggaggaggaggaggaaggggactctggc
tctgacatggatgtgaagaagagtggggggcgtcgccaccggctgctccgccacaaactg
acgctgagcgagggagagtcaggagaggagaaagagaaaccagccagcaaggggaagaag
gagaccaagaggaccagacggaaagtgggcagtgatgactcagcagacttagactctgag
gagtcggctagcagcagtgagtcaggagttagtgaggagatcagtgaggaggaggaggag
gagtcagaggaggagtcagaggagggcagcagtcgcaggaggaccacgcgctcctccaag
aagaagaagaagaagaaggaggagaggagctacgcccagaagaagaaacgccgtcgcatc
aaggttcaggactcttcatctgacgagaagagcgggtcaggagaggacggctcggggaag
gaggatggagacactcctaaaggacagaggaagaagatcagaaaaatcctcaaggacgac
aagctgaggacggaaacgagggatgccctgaaggaagaggaggagaggaggagacgcatc
gctgagagggagcagctcagggagaaactcagagaggtactcgtggtggaggaggcgtcc
gccgtggcttgtccaatcacaaccaagctggtgctggatgaagacgaggagaccaaggag
cccatggtgcaggttcaccgcaatctggtcactaagctcaaaccacaccaggtcgacggg
gtccagttcatgtgggactgctgttgtgagtcggtgaagaaaaccaacaagaactctggt
tctggatgtatcctggctcactgtatgggtctgggaaaaacactgcaggtggtaacccta
ctccacacactactgctgtgtgaaaagttagacttctccacggctctgatcgtctgtcct
ctcaacacggttctcaactggctcaatgagtttgagaagtggcagtacggcttcaaggac
gaggagagtttagaggtgacggagctggccacggtgaagcgtcctcaggagagagcttct
gctctgcagcagtggcaggaggatggaggaatcatgatcattggctatgagatgtaccgt
aacctcacacagggtagaaacatcaagagcaagaaactcaaagagaccttccagaagacc
ctggttgacccaggcccagactttgtgatctgtgatgagggccacatcttgaagaacgag
gcgtcggccatctctaaagccatgaactccatcaagacccgacggagagtggtgctcact
ggcacaccgctgcagaacaacctcatagagtaccactgcatggtgaacttcatcaaggag
aacctgctggggtcagtgaaggagttcaggaaccgcttcgtcaatcccatccagaacggg
caggcagcagactccacagaccaggatgtacggatcatgaagaagagggctcacatcctc
tacgagatgctcaatggatgtgttcagagaagagactactctgccctgaccaagttcctg
cctcctaaacatgagtacgttgtgtccgtcagagtcacgcccatccagtgtactctatac
cgacactacctggagcacttaacaggtgcggggaacgtggtggaggggggtcggggccga
gccgggaccaaactgttccaggacttccagatgctcagcagaatctggacccatccctgg
tgcctgcagctggactacatcagcaaggaaaacaaggggtactttgacgaggacagcatg
gacgagttcatcgcctcggagaccgaggagtcttccatgagcatgacctctgaagacgag
aaacagaaaaagaagaagaagcgagggaaggccaggaagaaggacagtgactcagacagt
gatgctctcgaggtgataaaggagtggaacaccagctcccgagggggagacccttccagc
cgcaaccgggcggagccagaggaggaagtgcggccagcttccagccctggcaccaggagt
cctgactggcacaaggagtttgttacggaggccgactctgagatcctggagcattctggg
aagatggtgctgctgtttgagatcctccgtatggccgaggaggtggaggacaaagttctg
gtgttcagtcagtctctgatctctctggacctgattgaagacttcctggagctgtctggc
cgagccaaagaggaggagaaacagtctccctacaaaggtgaggggaagtggttccggaac
atagactactaccgcttggacggctccaccaacgccctgaaccggaagaagtgggcagaa
gagttcaatgacaccagcaacgtccgaggtcggttgttcctgatctcgaccagggctggt
tctctgggcatcaacctgataggagctaacagggtcatcatcttcgacgcgtcctggaac
ccgtcgtacgacatccagagtatcttcaggctctaccgcttcggacagctcaagacctgc
tacgtttaccgattcctggctcagggtactatggaagagaagatctatgaccgccaggtg
gctaaacagtctctgtccttccgagtggtggatcaacagcagatagagagacatttcacc
atgaatgagctgacggagctctacgcctttgaacctgaccttctggatgatcccactggc
aagaagagcaagaggaccacgcctatgctgccaaaggaccccttcctagctgagctgctc
cacagcaataaggagcagattgtgggctatcatgaacatgactccctgctggatcacaag
gaagaggaggctctcagcgaggaggaccgcaaagcagcctgggccgagtacgaggcggag
aagaagggtctgtctctgcgtgtgaaccatggagcgtacggaggacagatggacatggga
ggagctaacagctacttccccttcaacgttgccgcactggcctctatgtccaaccctcag
ctggaggagttgatcaaccagggccgtcagaaggtgatggaggccaccaacgctctcaag
ttcctccccagagaatctctagaggacaccatcgggagagtgtggaaggagaacccagca
ctaacggagtcccaggtccaggccatggctctggggagacaggccagtgtagagatggaa
ctcaaacgaagagaagctgtctacagagacgtcctcaataagcaacagactctaatgatg
tacgttcagaaggtgatcaccaacaggaaggtgagagagcagcagatggccatggccaac
caggcccagctgatgagccagatgaacggcatgctgggagctggagggatgagccagatg
gaactcttggggttgtaccaacagctgggggcgctacagggtcatcccacccacccctcc
atgggcggcaagaaccccggcccctccaagggcaacctgtaa
DBGET
integrated database retrieval system