Oncorhynchus mykiss (rainbow trout): 110487996
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Entry
110487996 CDS
T07259
Symbol
vps28
Name
(RefSeq) vacuolar protein sorting-associated protein 28 homolog
KO
K12184
ESCRT-I complex subunit VPS28
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110487996 (vps28)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110487996 (vps28)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110487996 (vps28)
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
110487996 (vps28)
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110487996 (vps28)
Exosomal proteins of other body fluids (saliva and urine)
110487996 (vps28)
Exosomal proteins of colorectal cancer cells
110487996 (vps28)
Exosomal proteins of bladder cancer cells
110487996 (vps28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS28
Motif
Other DBs
NCBI-GeneID:
110487996
NCBI-ProteinID:
XP_021415610
Ensembl:
ENSOMYG00000011390
LinkDB
All DBs
Position
32:complement(15937303..15945277)
Genome browser
AA seq
223 aa
AA seq
DB search
MFHGIPVTGGMGGAPANKPELYEEVKLYKNAREREKFDNMAELFAVVKTLQALEKAYIKD
CVTPNEYTAACSRLLVQYKAAFKQVQGSDVGSIDDFCRKYRLDCPLAMERIKEDRPITIK
DDKGNLNRCIADIVSLFITVMDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDNEAKDK
VNLWLTTLSSMSASDELDDSQVRQMLFDLESAYNAFNRFLHSS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgtttcacggaatacctgtcacgggaggtatgggaggagctcctgccaataaacctgaa
ttgtatgaggaagtaaaattgtacaagaatgcaagagaacgagagaagtttgacaacatg
gcagagctgtttgctgtggtgaagacacttcaggccctggagaaagcttacatcaaagac
tgtgtgacccctaatgagtacacggctgcttgctccaggctgctggtgcaatacaaggct
gctttcaaacaggtccagggatctgacgtgggttctatcgatgacttctgcaggaagtac
agacttgactgcccgctagctatggagagaatcaaggaggatcgaccaatcaccatcaag
gatgacaagggcaacctgaatcgctgcattgcagatatcgtatcgctctttatcactgtg
atggacaagctacgtctggagatccgggccatggatgagatccaaccagacctgagagag
ctgatggagaccatgaacagaatgagcaacatgcccccagacaatgaggccaaggacaaa
gtcaacctctggttgaccactctcagcagcatgtcagcctctgatgagctggacgactcc
caggttcgccagatgctgtttgacctggagtcagcctacaatgccttcaaccgcttctta
cactcctcctaa
DBGET
integrated database retrieval system
