Oncorhynchus mykiss (rainbow trout): 110487999
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Entry
110487999 CDS
T07259
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110487999 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
110487999 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110487999 (nup153)
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110487999 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
110487999
NCBI-ProteinID:
XP_021415620
Ensembl:
ENSOMYG00000011509
LinkDB
All DBs
Position
32:complement(16013134..16036588)
Genome browser
AA seq
1442 aa
AA seq
DB search
MVNAMTGQLEQLSGAESIFNLAMAATGGGKIRSRRCHSASKPYAKSKQQPGLISRVTDTV
KSIVPSWLQKYFRNGEAAEGGGAVVGAEQNSQAPPPNGSEEVAPRPDGRDTPEPGTSNTE
PSTSRASLNFQDVLSRPPLNRSHLHFPSLDTSLARRGPSSLFSQPSTSSAPFVGASPSFS
LVKEIKDNSSQHEDDNISTTSGFSSRASDKDVPNSKTASLPQLWSPEMDRTHSGPQQSQS
SLKKPAFNLSVFGTSSTSTMNSSVLNSSQLGDSPFYPGKTTYGGAAAVRTARSRTAIPYQ
APLRRQIKAKPAGAQPCGVTSATARRILQSLERMSSPLADAKRIPSTVSSPLSTSLDGST
LHLSHFQAKKKLLDSPLPPVQKLVIPAAASVSGNRSMSFRPSLTPGGVTRTPRDTPTRQS
PLIPEAVAGPSQSTSSILPTYPLSSTPAFSSTGSGGGKMKRERTSTRPSSKRPEDQIAEL
SDLPAISLPHSPSFSLPSFSFFQPPTATVTPTAALTTSPVLEEPIPNKVPPTTAPSTPPS
TPFTFSSPIVMATAASPPSFSPSSGFTFSAPVVKMGLSLSNGKMATPVLSAVKHAASESM
DEFEGPYKPAKVLKQGSVLDLLNGPGFAVPVTQTSPVPKAHQETPALSTNTPSLGDLFKA
TTRSWDCDACVVQNKPTDTKCVTSVTPRLNSGSSLAKTDSIPLLSGLEGSTTTTTPAATF
GALFTKPAGSWDCDTCLVQNKPDAVKCVACETTKPGTGVKATLTMPAFLEAKTLPAAAPL
LGFGDKFKKPEGAWECGVCMVQNKAQDTKCVSCGIAKPGATAAPPSLTPAPVSATPLLGF
GAQFKKPEGAWECDVCCVENKGADKECVACQTPKPGAKVEPKAFGSSSFGIQSFSDSGGF
KFGMGASSDSGSGGFKFGGTLLDSSSSGGFKFGASASSDSTSTDTSSSAGFKFGGSSEGC
KFAASAASTPAVDEGKKAEAPSMGAGFKFGVGGGLSFGTAAAASTESEPPYSGFSFHLVA
TSDSSSTFSLPVSTENDSGASTETTTTTTAAAPMFGKLAEAKATALTTPLGGSIFRESLE
KDKAPSFTFGKHEKEVASMGSGFLFSVPSKEGVASAPSTGFSFSKPDPPKDQPNAPALAF
EKPEDQSETLAAEAPKPSFSFGQSTTDAAAPKPAFGFMASTTTTSSSSSSTPAPAPIPAP
STFLFGQSASTEATPAKSFLFGQSQDSLPAPAVSLNPGPAQPFLFGSGPNAAAPSFTFGA
AAPSTAAPSAAPAPFVFSPASSTGFGSGQAPNFGQGTPHPSAPAFGSPAPSPFSATASQP
PAFGAKPNSVPVFGHQANSTPAFGSSAPTTPGGGFQFGGASVFGTSSNSTGVFAFGGAPG
GSPAPSATPSIAPQPSAPGSGFNFAAPPTFNIGSKSTTFTAAATGQHSIPGRKIKTAVRR
KK
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggttaatgctatgacaggacagttggaacagctatccggtgccgagtcgatattcaat
ctagccatggcggccacgggtggagggaaaattagaagcagaagatgtcatagcgcttcg
aaaccttacgccaaaagcaaacagcagcctggcctgattagtcgagtgacagacacggtc
aagagcatcgttccttcttggctgcagaaatacttcaggaatggggaggctgcagagggg
ggaggggccgtagtgggggcggagcagaacagccaggcccctcccccaaatggcagcgag
gaggtagcaccacgtcctgatggacgggacactccggagcccggtaccagcaatacagaa
ccttcgacaagcagggcatccctgaacttccaggatgtcctgtcgaggccccccctcaac
cgctctcacctccacttcccctccttggacacctccctggcccgcaggggccccagctct
ctcttctcccagccctccacctcctctgcccccttcgttggggcctcgcccagcttctcc
cttgtcaaagagatcaaggacaacagctcacagcacgaggacgacaacatctctaccacc
agcggcttctcttcacgtgcatcagacaaagatgtacctaattcaaagaccgcatcgcta
ccccagctctggtccccggagatggaccggacccactctgggcctcagcagtcccagtcc
agtctcaagaagcctgcgttcaacctgtctgtctttgggacgtcctccacttctacgatg
aacagttcagtgctgaattccagtcagttgggggattcccccttctacccagggaagact
acctacgggggagcggctgctgttagaacagcccgttcacgcacagccataccttaccag
gctccattgcggagacagatcaaggccaagcctgctggagctcagccctgtggggtgacc
agcgctaccgcccgacgcatcctacagtccctggagcgcatgtccagccccctcgctgat
gccaagagaatcccctctacagtttcctctcccttatcaacatcactggatggcagcact
ctacacctttcacattttcaggccaaaaagaaactgctggactctcccctccccccagtc
cagaagctggtgatcccggcggcagcgtcagtgtcggggaaccgttccatgtcgttcagg
ccctctctgacccctgggggcgtgactcggacccctagagacacgcccacaagacaatcc
cctctgattcctgaagcagtggcaggtccttctcaaagcacaagcagcattctacccacc
taccctctgtccagcactcctgcattcagcagcacagggtcaggaggtgggaagatgaag
agggagaggaccagcacaagaccctcttccaaacgtcctgaagaccagatcgctgagcta
tcggacctgccagccatctcgctcccccacagcccgtccttcagtctgcccagcttcagc
ttcttccagcctcccaccgccacagtcacgcccactgccgctctcactacctcacctgtc
ctggaggagcccatccctaacaaggtgccaccgactacagccccctctacccctccctcc
acacctttcaccttctcctcccccatcgtcatggcaactgctgctagcccaccgtccttc
tccccgtcttctggatttaccttcagtgcacctgtagtgaaaatgggtctgtcactatcc
aacgggaagatggccaccccagtattatcagcagtgaagcacgctgccagtgagagcatg
gatgagtttgaagggccatataaaccagccaaggtgttgaaacagggcagtgttctggac
ctcctgaatggacctggatttgccgttcctgttactcagacctcccctgtccccaaagcc
caccaggagaccccagcactgtccaccaacaccccctcccttggggacttgttcaaagca
acaacacgttcctgggattgtgacgcctgtgtggtgcagaacaaacccactgacaccaag
tgtgtgacctctgtgaccccacgactaaactctggttcctctttagcaaaaaccgacagt
atacccttgttgtccgggctggagggttccaccaccaccactactcccgctgcaactttt
ggggccctgttcacaaagcctgcaggaagctgggactgtgacacttgtctggttcagaac
aagcctgatgctgtcaaatgtgtggcctgtgagacaaccaagcctgggactggagttaag
gccacactgactatgcctgccttcttggaggctaagactctgcccgctgctgccccactc
ctgggcttcggagacaagtttaagaagccagagggagcatgggagtgtggcgtgtgcatg
gtgcagaacaaggcgcaggacaccaagtgtgtttcctgtgggatcgctaagccaggagca
acggctgcgcctccatctctaactcccgcccctgtcagcgccactcctctactaggcttt
ggggcccagttcaagaagccagagggagcgtgggagtgtgacgtgtgctgtgttgagaac
aagggagcagacaaggagtgtgtggcctgccagacccccaagcctggagctaaagtagag
cccaaagcatttggttcctcatcgtttggtatccagtccttttctgactcggggggattc
aagtttggcatgggggcgtcatcggactctggttctgggggcttcaaatttggcggcacc
ctcttggactcctcatcttcagggggcttcaaatttggtgcatctgcctcatcggactct
acctcgacagacaccagcagctctgcaggcttcaaatttggaggctcctctgagggatgc
aaatttgcagcttcagctgcttccacccctgcagtggacgaggggaagaaggctgaagcc
cccagtatgggtgccgggttcaaattcggcgtcggcggtgggctctcgtttggcactgca
gcagctgctagcacggagagcgaacccccttacagtgggttctcctttcatctggtggca
acctctgattcctcctctactttcagcctccctgtttctacagagaatgacagtggagct
tctacagaaaccacgaccaccaccacagcagcagcgcctatgtttgggaagctggctgaa
gccaaggctactgcgctgaccacaccactagggggcagcatattcagggaatcactagag
aaagacaaggccccttctttcacctttgggaagcatgagaaggaagttgcctctatgggt
tctgggttcctgttcagtgttcctagtaaagagggggtggcatcagctccatctacaggc
ttttccttcagtaagccagacccacctaaagaccagcccaatgcacctgccttggccttt
gagaagccggaagaccagagtgagaccctagcagcagaagcccctaaaccctcattcagc
tttgggcaaagcacaacagatgctgcagccccaaagccagcatttgggttcatggcaagc
accaccaccacctcttcttccagcagctctacccctgccccagcccccatcccggccccc
agtaccttcctgttcgggcagagtgcctctactgaggccaccccagccaagtccttcttg
tttgggcagagccaggacagcctgcctgcccctgcagtctctctgaaccctggcccggct
cagcccttcctgtttgggtctggacctaatgctgctgctccctccttcacttttggagca
gcggcaccctccactgcagctccatcagcagcccctgctccgtttgtattcagccctgcc
tcctccactgggtttgggtcaggacaagctcctaactttggtcagggcaccccccatccc
agtgccccagcgtttggttcccctgccccgtcccccttctctgccactgcctcccagccc
cctgccttcggagccaagcccaactctgtccccgtgtttggccaccaagccaactccact
cctgcttttggctcatccgcccccaccacaccaggtggaggtttccagttcggcggagcc
agtgtgttcggcacctccagtaacagcacgggggtgtttgctttcggaggggcaccagga
gggtcccccgccccttctgccacgccctccatcgcaccccaacccagtgcacctggaagt
ggtttcaacttcgcagcaccccctacctttaatattggatcaaagagcaccaccttcact
gcagctgccacaggacagcactcaatccccggtcgcaagatcaaaacagccgtccgacgt
aagaagtaa
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