KEGG   Oncorhynchus mykiss (rainbow trout): 110488005
Entry
110488005         CDS       T07259                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137  Mitophagy - animal
omy04144  Endocytosis
omy04145  Phagosome
omy04148  Efferocytosis
omy05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:omy00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    110488005
   04145 Phagosome
    110488005
   04137 Mitophagy - animal
    110488005
   04148 Efferocytosis
    110488005
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    110488005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110488005
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110488005
   04031 GTP-binding proteins [BR:omy04031]
    110488005
Membrane trafficking [BR:omy04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    110488005
 Endosome - Lysosome transport
    110488005
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110488005
  Exosomal proteins of other body fluids (saliva and urine)
   110488005
  Exosomal proteins of colorectal cancer cells
   110488005
  Exosomal proteins of bladder cancer cells
   110488005
GTP-binding proteins [BR:omy04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    110488005
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 Gtr1_RagA GTP_EFTU RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 110488005
NCBI-ProteinID: XP_021415627
Ensembl: ENSOMYG00000002847
UniProt: A0A060VST9
LinkDB
Position
2:34177043..34185964
AA seq 216 aa
MASKGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTICLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYADDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQADGAYSGRNRGVDLTEAAQPASRSCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtaagggtggtgcaacacgacccaatgggccgaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgccgtgggaaagtccagtcttgtacttcgc
ttcgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacaatatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcttagcacccatgtactacagaggtgcccaggccgcaatcgtggtc
tacgacatcactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagctttagctgggaacaaagctgaccttgcaaac
aaaagagcattggattttcaggatgcccagtcgtacgcagatgataacagtttactgttc
atggaaacatcagcaaagacctctatgaatgttaatgaaatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgacggcgcgtacagtgggcggaaccggggagtg
gatcttacggaggcagctcagccggccagtcgctcctgctgcagtacctaa

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