KEGG   Oncorhynchus mykiss (rainbow trout): 110488086
Entry
110488086         CDS       T07259                                 
Name
(RefSeq) collagen alpha-1(XXVIII) chain
  KO
K23619  collagen type XXVIII alpha
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:omy01002]
    110488086
Peptidases and inhibitors [BR:omy01002]
 Peptidase inhibitors
  Family I2: Kunitz - BPTI family
   110488086
SSDB
Motif
Pfam: VWA Collagen VWA_2 Kunitz_BPTI VWA_3 VWA_CoxE
Other DBs
NCBI-GeneID: 110488086
NCBI-ProteinID: XP_021415768
Ensembl: ENSOMYG00000005500
UniProt: A0A8C7VAD2
LinkDB
Position
2:complement(34406067..34422793)
AA seq 1188 aa
MLRKDNMGKGVALFLLLLALLHEAIGQRRRKGKYSVLRDGENDMTTCSMEVAFILDSSEG
AKTFLFEKQKSFVLQFSTRLTMLQLSGWTLKLRMAALQYSSSVSVEHSFTAWQDLDVFHS
RVSSMVYIGHGTYSTYAITNATQLFTQETKEDSVRVAVLMTDGADHPRNPDVIGAAADAK
GSGVKLIAIGLSDLARQSQNSAKLRAIASTPAKQFVHSLTDPQLEEKLLKELGAIALEAC
PQAEVCLCERGERGPPGNPGTKGDPGYEGPSGPKGSRGEPGVGGRPGSDGLEGSPGYKGD
KGEIGDCGTPGGKGDEGPGGPPGPRGPRGDQGVNGPPGDQGPEGQTGPKGDQGTTGASGP
AGDIGIGFPGPKGAKGIQGRPGTLGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLPGSKGD
RGHDGPRGERGLTGVGIKGDKGNPGQLGSQGPVGMPGAGIQGEKGNQGPVGPPGPRGNPG
VGLMGQKGSQGFSGEPGIPGESGVGEPGPKGDPGSEGLPGIPGLSGEDGDIGQKGDIGLH
GPRGPDGAPGKGVPGEKGARGERGSRGQLGAVGPVGPMGAKGEAGSAGRAGTNGPPGRGL
PGIKGDPGAVGPPGHVGEPGIGITGPKGERGLPGPIGPPGLEGEGLPGTPGAPGVPGLTG
ETGPEGKGLPGPKGDRGTPGPTGLAGAPGVGLMGPKGSAGQIGAPGPQGLPGEGIQGPKG
ESGFQGIPGPRGPPGQGIQGDKGDRGFVGERGRKGDRGETGETGTAGPLGRLGEKGEPGL
TREEVIKLVRSICGCGVKCRESPLELVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRE
TTRVGVVLYSHIDMVVVSLHQQASRDQVKKAVRTMTYLGEGTFTGSAIHQANQVFRAARP
GVRKVAIVITDGQADERDSVRLEEAVKEANGSNIETFVIGVVNQSDPLYEEFKKELHLMA
SDPDREHVYLIDDFRTLPALESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETP
ERTDTDTPTFNGDFKKTHMVPGPPGESDRVFTPQGSQTGDRDNSETYRVPSFDREPFKRL
PEFLLPSEMKNPSHSVVMTGSQAPTQRPLPVVKLPGLPPTSPPLPQDDLIPDERCGQTLD
PGPCRNYFVKWYYDTTANACAQFWFGGCQGNQNRFESEKSCKKTCVKV
NT seq 3567 nt   +upstreamnt  +downstreamnt
atgttgagaaaggacaacatggggaaaggagtggctctgttccttctactgttggcactt
cttcacgaggctataggccagagaagaagaaaaggaaagtacagtgtcctcagagatgga
gaaaatgacatgacaacatgctccatggaggtggccttcattctggacagttcggagggc
gccaagaccttcctgttcgagaagcagaagtccttcgttctgcaattcagcactcgtctc
accatgctccagttgtctggatggaccctaaagctgcggatggctgctctccagtacagc
agctctgtgtctgtagagcacagcttcactgcctggcaggacctggatgtgttccacagc
agagtcagctccatggtctacattggccatggcacctactccacctacgccatcaccaac
gccacacagctcttcacccaggagaccaaggaggacagcgtcagggtggcggtgctcatg
accgacggtgccgatcatccgaggaaccctgatgtgatcggagcagcggcggatgctaag
ggtagtggcgtgaagctcattgctatagggttgtcggacctggcccgccagagccagaac
agtgccaaactccgggctatcgccagcacaccggccaagcaattcgtccacagtctcact
gacccccagctagaggagaagttactgaaagagttgggtgcaatagcgcttgaggcgtgt
ccacaggctgaagtgtgtttgtgtgaaagaggggagagaggccctcctggaaacccaggt
acaaaaggagatccaggatatgaaggaccatctggtccaaaaggatcaaggggagaacct
ggagtcggtggccgaccaggaagtgacggtcttgagggcagtcctggttataaaggtgac
aagggggagataggagactgtggcacccctggggggaaaggagatgaaggccctggagga
cctcctggcccacggggacctagaggagaccagggtgttaatggaccacccggggaccag
ggtccggagggccaaacaggacctaaaggggaccaaggaaccaccggtgcatctggacca
gcaggtgacattggcattgggttcccaggtccaaagggggccaaaggaattcagggaaga
ccaggaacccttggtcccattggaattggagagccaggacagccaggacccccaggactt
gctggagcacagggtaaccagggagctgttggggaggggctccctggctcaaagggggat
cgaggccatgatggccccagaggtgagcgtggtctcactggtgttgggatcaaaggtgat
aagggaaatcctggacagcttggatcacaaggaccggtgggaatgccaggggcaggaatt
caaggagaaaaggggaaccaagggccagttggccctccaggccccagagggaatccaggt
gtgggacttatgggccaaaagggaagccaaggcttctcaggtgagcctggaatcccaggg
gagagcggtgttggggagccaggacctaaaggagacccaggatcggaggggttgcctggt
attccgggcctctctggagaggatggagacataggacagaagggtgacattgggttacat
gggcccaggggacctgatggggcacccggaaaaggtgtccctggagaaaagggggcccga
ggcgagcggggctccaggggccagctaggggcagtagggcctgtggggccaatgggggcc
aagggtgaagccggaagtgctggacgagcaggtacaaacggaccacctgggcgggggtta
cccggtatcaagggggaccctggtgcggtcggcccacccggacatgttggtgaaccagga
ataggaatcacaggaccgaagggtgagagagggctaccagggcccattggtccacctggg
cttgaaggggaaggccttcctggaactccaggagcccctggagtaccaggactgacaggt
gagactggaccagaaggaaaaggtttacctggtcctaagggagaccggggaactccaggc
cccacaggactagctggagcaccaggagttgggctaatgggccccaaggggtcagctggt
cagattggagcaccgggtccccagggactgcctggagagggcattcaaggaccaaagggg
gagtcaggattccaggggatcccgggccccagggggcccccaggacaaggtattcaaggg
gataagggagacagggggttcgtgggtgaacgaggcagaaagggggacaggggagagact
ggagagacaggaacggctggacctttgggcagactgggagaaaaaggggaacctggccta
acaagagaggaggtcatcaaactggtcagatctatatgtggttgtggggtgaagtgccgt
gagagcccactggagttggtctttgtgattgacagctcagagagtgtgggccctgacaac
ttcaacgtggtgaaggactttgtgaacgctctggtcgaccgtgcctccgtgagccgggag
accactcgcgtcggggtggtcctctacagccacatcgacatggtggtggtcagtctgcac
cagcaagccagccgggaccaggtgaagaaggcggtccgcactatgacctacctgggcgaa
ggcactttcacgggcagcgccatccatcaggccaaccaggtgttccgggcggccaggccc
ggggtgaggaaagtggccatagtgatcacagatggacaggcggacgagagggactctgtg
aggctggaggaggcagtgaaagaggccaatggcagtaacattgagacgtttgtcatcggg
gtggtgaaccagagtgatccgctgtacgaggagtttaagaaagagctccacctcatggcc
tctgacccagacagggaacacgtctacctgattgatgacttcaggacacttcctgccctt
gagagcaagctgctgagtcggatctgtgagagtgatggcggggcccaattcagctccatc
cctagctccagatactcccccggaacccctggacaagccgggattgtcagggaaacccca
gagaggactgatactgacacgcccactttcaatggagactttaaaaaaacacatatggtg
ccaggtccaccaggagagtcagacagagtctttaccccacagggctcccagaccggggac
cgagataactcagagacctacagggtcccatcctttgacagggaacccttcaagcgccta
ccagagttccttcttccgtcagagatgaagaacccctcccacagtgtggtcatgacgggc
tcccaggcccccacccagaggccccttcccgtagtaaagttacccgggctccccccaacc
tctccacctctgccccaggatgatttaataccggatgagagatgtggacagactctggac
cccgggccttgcaggaattactttgtgaagtggtactatgacactacggctaatgcctgt
gcccagttctggttcggaggctgtcagggaaaccaaaaccgatttgagtcggagaagagc
tgcaaaaaaacctgtgttaaggtctaa

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