Oncorhynchus mykiss (rainbow trout): 110488086
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Entry
110488086 CDS
T07259
Name
(RefSeq) collagen alpha-1(XXVIII) chain
KO
K23619
collagen type XXVIII alpha
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110488086
Peptidases and inhibitors [BR:
omy01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
110488086
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GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
110488086
NCBI-ProteinID:
XP_021415768
Ensembl:
ENSOMYG00000005500
UniProt:
A0A8C7VAD2
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Position
2:complement(34406067..34422793)
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AA seq
1188 aa
AA seq
DB search
MLRKDNMGKGVALFLLLLALLHEAIGQRRRKGKYSVLRDGENDMTTCSMEVAFILDSSEG
AKTFLFEKQKSFVLQFSTRLTMLQLSGWTLKLRMAALQYSSSVSVEHSFTAWQDLDVFHS
RVSSMVYIGHGTYSTYAITNATQLFTQETKEDSVRVAVLMTDGADHPRNPDVIGAAADAK
GSGVKLIAIGLSDLARQSQNSAKLRAIASTPAKQFVHSLTDPQLEEKLLKELGAIALEAC
PQAEVCLCERGERGPPGNPGTKGDPGYEGPSGPKGSRGEPGVGGRPGSDGLEGSPGYKGD
KGEIGDCGTPGGKGDEGPGGPPGPRGPRGDQGVNGPPGDQGPEGQTGPKGDQGTTGASGP
AGDIGIGFPGPKGAKGIQGRPGTLGPIGIGEPGQPGPPGLAGAQGNQGAVGEGLPGSKGD
RGHDGPRGERGLTGVGIKGDKGNPGQLGSQGPVGMPGAGIQGEKGNQGPVGPPGPRGNPG
VGLMGQKGSQGFSGEPGIPGESGVGEPGPKGDPGSEGLPGIPGLSGEDGDIGQKGDIGLH
GPRGPDGAPGKGVPGEKGARGERGSRGQLGAVGPVGPMGAKGEAGSAGRAGTNGPPGRGL
PGIKGDPGAVGPPGHVGEPGIGITGPKGERGLPGPIGPPGLEGEGLPGTPGAPGVPGLTG
ETGPEGKGLPGPKGDRGTPGPTGLAGAPGVGLMGPKGSAGQIGAPGPQGLPGEGIQGPKG
ESGFQGIPGPRGPPGQGIQGDKGDRGFVGERGRKGDRGETGETGTAGPLGRLGEKGEPGL
TREEVIKLVRSICGCGVKCRESPLELVFVIDSSESVGPDNFNVVKDFVNALVDRASVSRE
TTRVGVVLYSHIDMVVVSLHQQASRDQVKKAVRTMTYLGEGTFTGSAIHQANQVFRAARP
GVRKVAIVITDGQADERDSVRLEEAVKEANGSNIETFVIGVVNQSDPLYEEFKKELHLMA
SDPDREHVYLIDDFRTLPALESKLLSRICESDGGAQFSSIPSSRYSPGTPGQAGIVRETP
ERTDTDTPTFNGDFKKTHMVPGPPGESDRVFTPQGSQTGDRDNSETYRVPSFDREPFKRL
PEFLLPSEMKNPSHSVVMTGSQAPTQRPLPVVKLPGLPPTSPPLPQDDLIPDERCGQTLD
PGPCRNYFVKWYYDTTANACAQFWFGGCQGNQNRFESEKSCKKTCVKV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgttgagaaaggacaacatggggaaaggagtggctctgttccttctactgttggcactt
cttcacgaggctataggccagagaagaagaaaaggaaagtacagtgtcctcagagatgga
gaaaatgacatgacaacatgctccatggaggtggccttcattctggacagttcggagggc
gccaagaccttcctgttcgagaagcagaagtccttcgttctgcaattcagcactcgtctc
accatgctccagttgtctggatggaccctaaagctgcggatggctgctctccagtacagc
agctctgtgtctgtagagcacagcttcactgcctggcaggacctggatgtgttccacagc
agagtcagctccatggtctacattggccatggcacctactccacctacgccatcaccaac
gccacacagctcttcacccaggagaccaaggaggacagcgtcagggtggcggtgctcatg
accgacggtgccgatcatccgaggaaccctgatgtgatcggagcagcggcggatgctaag
ggtagtggcgtgaagctcattgctatagggttgtcggacctggcccgccagagccagaac
agtgccaaactccgggctatcgccagcacaccggccaagcaattcgtccacagtctcact
gacccccagctagaggagaagttactgaaagagttgggtgcaatagcgcttgaggcgtgt
ccacaggctgaagtgtgtttgtgtgaaagaggggagagaggccctcctggaaacccaggt
acaaaaggagatccaggatatgaaggaccatctggtccaaaaggatcaaggggagaacct
ggagtcggtggccgaccaggaagtgacggtcttgagggcagtcctggttataaaggtgac
aagggggagataggagactgtggcacccctggggggaaaggagatgaaggccctggagga
cctcctggcccacggggacctagaggagaccagggtgttaatggaccacccggggaccag
ggtccggagggccaaacaggacctaaaggggaccaaggaaccaccggtgcatctggacca
gcaggtgacattggcattgggttcccaggtccaaagggggccaaaggaattcagggaaga
ccaggaacccttggtcccattggaattggagagccaggacagccaggacccccaggactt
gctggagcacagggtaaccagggagctgttggggaggggctccctggctcaaagggggat
cgaggccatgatggccccagaggtgagcgtggtctcactggtgttgggatcaaaggtgat
aagggaaatcctggacagcttggatcacaaggaccggtgggaatgccaggggcaggaatt
caaggagaaaaggggaaccaagggccagttggccctccaggccccagagggaatccaggt
gtgggacttatgggccaaaagggaagccaaggcttctcaggtgagcctggaatcccaggg
gagagcggtgttggggagccaggacctaaaggagacccaggatcggaggggttgcctggt
attccgggcctctctggagaggatggagacataggacagaagggtgacattgggttacat
gggcccaggggacctgatggggcacccggaaaaggtgtccctggagaaaagggggcccga
ggcgagcggggctccaggggccagctaggggcagtagggcctgtggggccaatgggggcc
aagggtgaagccggaagtgctggacgagcaggtacaaacggaccacctgggcgggggtta
cccggtatcaagggggaccctggtgcggtcggcccacccggacatgttggtgaaccagga
ataggaatcacaggaccgaagggtgagagagggctaccagggcccattggtccacctggg
cttgaaggggaaggccttcctggaactccaggagcccctggagtaccaggactgacaggt
gagactggaccagaaggaaaaggtttacctggtcctaagggagaccggggaactccaggc
cccacaggactagctggagcaccaggagttgggctaatgggccccaaggggtcagctggt
cagattggagcaccgggtccccagggactgcctggagagggcattcaaggaccaaagggg
gagtcaggattccaggggatcccgggccccagggggcccccaggacaaggtattcaaggg
gataagggagacagggggttcgtgggtgaacgaggcagaaagggggacaggggagagact
ggagagacaggaacggctggacctttgggcagactgggagaaaaaggggaacctggccta
acaagagaggaggtcatcaaactggtcagatctatatgtggttgtggggtgaagtgccgt
gagagcccactggagttggtctttgtgattgacagctcagagagtgtgggccctgacaac
ttcaacgtggtgaaggactttgtgaacgctctggtcgaccgtgcctccgtgagccgggag
accactcgcgtcggggtggtcctctacagccacatcgacatggtggtggtcagtctgcac
cagcaagccagccgggaccaggtgaagaaggcggtccgcactatgacctacctgggcgaa
ggcactttcacgggcagcgccatccatcaggccaaccaggtgttccgggcggccaggccc
ggggtgaggaaagtggccatagtgatcacagatggacaggcggacgagagggactctgtg
aggctggaggaggcagtgaaagaggccaatggcagtaacattgagacgtttgtcatcggg
gtggtgaaccagagtgatccgctgtacgaggagtttaagaaagagctccacctcatggcc
tctgacccagacagggaacacgtctacctgattgatgacttcaggacacttcctgccctt
gagagcaagctgctgagtcggatctgtgagagtgatggcggggcccaattcagctccatc
cctagctccagatactcccccggaacccctggacaagccgggattgtcagggaaacccca
gagaggactgatactgacacgcccactttcaatggagactttaaaaaaacacatatggtg
ccaggtccaccaggagagtcagacagagtctttaccccacagggctcccagaccggggac
cgagataactcagagacctacagggtcccatcctttgacagggaacccttcaagcgccta
ccagagttccttcttccgtcagagatgaagaacccctcccacagtgtggtcatgacgggc
tcccaggcccccacccagaggccccttcccgtagtaaagttacccgggctccccccaacc
tctccacctctgccccaggatgatttaataccggatgagagatgtggacagactctggac
cccgggccttgcaggaattactttgtgaagtggtactatgacactacggctaatgcctgt
gcccagttctggttcggaggctgtcagggaaaccaaaaccgatttgagtcggagaagagc
tgcaaaaaaacctgtgttaaggtctaa
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