Oncorhynchus mykiss (rainbow trout): 110488087
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Entry
110488087 CDS
T07259
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110488087
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110488087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
110488087
NCBI-ProteinID:
XP_021415765
Ensembl:
ENSOMYG00000008964
LinkDB
All DBs
Position
32:21535605..21547883
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AA seq
675 aa
AA seq
DB search
MNIEVSPIPKLYPVAEVFPWNEFSYTPRLSPTEPHDTDGWLSALPAFHNHHPPYPICERM
QQSGTQCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELVQ
TGASPEGMEKEGAPTTMSVLIARGETLSSLPLTPPPIWEDAASEEEDDLKPIVIDGSNIA
MSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVSITDQHILRELERKK
IMVFTPSRRVAGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLLM
FSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGIKCKFYHPERVNQ
SNRSLADELREKAKLPLSQQKHPTTGPGLAYGLSLEEQMAQKLTLEQWNGSLKKGLTSEN
VLLLKGGHRSSWTSPAKKASTNRHSLTDLDSALASGSQERLDSGLGSFESQASDPSRNHC
DHYSNAGYRNCQSKSAPSMKQQRYSLPSDPPCNCCSHAPQPSGPSAGYQQHHSPHHSMGP
ASTHNPDMMTYYPPCYPNYGTPMYPVSMHQYSHPSDFQQQGRVHRSQQTFWSDPFGTYPQ
TLHCIAQVEQQRHWSPARTQPSPHGECREREDVRKKLLAIFNGRLVDRAMDMFPHLMDPQ
RLAAEILTLRSSQGL
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgaacatagaagtcagtcccatcccaaagctgtacccagtcgcagaggtcttcccatgg
aatgagttctcctacacaccccgtctgagccccacagagccccacgacacagacggatgg
ctctccgctctgcctgccttccacaatcatcatccaccctatcccatctgtgagagaatg
cagcagagtggcacccaatgctctgctccagaggagagcggcaagaccgccacagaccct
ggagaggctcagctggacttctaccgtaaactgggctactccccagcgcaggtccagacc
gtgctgcagaagtttggcctgaacacagacactaacaggattctgggggaactggtgcag
actggagccagcccagaagggatggagaaggagggagccccaactaccatgtctgtcctg
attgctagaggggagacccttagtagcctgcccctcacccctccaccaatttgggaggat
gcagccagtgaggaggaagatgacctgaaacccatagtgatcgatgggagtaatatagct
atgagccacggaaacaaggaagtgttttcctgcctgggaatccagctggctgtgaacttc
ttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggagcag
cccagaccagatgtctccatcacagatcaacacattttgcgtgagctggagagaaagaaa
atcatggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctacgatgat
cgcttcatcgtcaagctggcgtacgagtcagacggtgtcatcgtatccaacgacacatac
cgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctcatg
ttctcgttcgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggtccc
accctggagaactttctacggaaggttcctcggttaccacgcaaacagccatgtccttac
ggaaggaaatgcacatatggaataaagtgtaaattctaccacccggagcgagtcaaccaa
tccaatcgctctttggctgacgagctgcgggagaaggccaagctgcccttgtcacaacag
aaacaccccaccacaggtcctggacttgcctatggcctttccctggaggagcagatggct
cagaaactgaccctagaacagtggaatggctccttgaagaaaggcctcaccagtgagaat
gttcttcttctcaagggaggtcatcgctccagctggacgtccccagctaagaaggccagc
accaaccgacattccctgaccgacctggactcggccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccactgt
gatcactatagcaacgctgggtacaggaactgccagtcaaagtccgcccccagtatgaaa
caacaacgctattctctccctagcgacccgccttgtaactgctgctcccatgctcctcag
ccttcaggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggccca
gccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactatgga
acaccaatgtatccagttagtatgcatcagtatagccaccccagtgacttccaacagcag
ggcagggtccaccgttcacagcagaccttctggtcggacccgtttgggacttatcctcag
actctccattgcattgctcaggtggagcagcagagacactggtcccctgcccggacacag
ccgagcccccatggggagtgcagggagagggaggatgtcaggaagaagctgctggccatc
tttaacggccgtctggtggacagggccatggacatgttcccccatctcatggacccacag
agactggctgctgagatcctcaccctgagatcctctcagggcctgtga
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