KEGG   Oncorhynchus mykiss (rainbow trout): 110488087
Entry
110488087         CDS       T07259                                 
Name
(RefSeq) ribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110488087
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110488087
SSDB
Motif
Pfam: RNase_Zc3h12a UBA_6 Regnase_1_C zf-CCCH_4 zf-CCCH_2
Other DBs
NCBI-GeneID: 110488087
NCBI-ProteinID: XP_021415765
Ensembl: ENSOMYG00000008964
LinkDB
Position
32:21535605..21547883
AA seq 675 aa
MNIEVSPIPKLYPVAEVFPWNEFSYTPRLSPTEPHDTDGWLSALPAFHNHHPPYPICERM
QQSGTQCSAPEESGKTATDPGEAQLDFYRKLGYSPAQVQTVLQKFGLNTDTNRILGELVQ
TGASPEGMEKEGAPTTMSVLIARGETLSSLPLTPPPIWEDAASEEEDDLKPIVIDGSNIA
MSHGNKEVFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVSITDQHILRELERKK
IMVFTPSRRVAGKRVVCYDDRFIVKLAYESDGVIVSNDTYRDLQGERQEWKRFIEERLLM
FSFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGIKCKFYHPERVNQ
SNRSLADELREKAKLPLSQQKHPTTGPGLAYGLSLEEQMAQKLTLEQWNGSLKKGLTSEN
VLLLKGGHRSSWTSPAKKASTNRHSLTDLDSALASGSQERLDSGLGSFESQASDPSRNHC
DHYSNAGYRNCQSKSAPSMKQQRYSLPSDPPCNCCSHAPQPSGPSAGYQQHHSPHHSMGP
ASTHNPDMMTYYPPCYPNYGTPMYPVSMHQYSHPSDFQQQGRVHRSQQTFWSDPFGTYPQ
TLHCIAQVEQQRHWSPARTQPSPHGECREREDVRKKLLAIFNGRLVDRAMDMFPHLMDPQ
RLAAEILTLRSSQGL
NT seq 2028 nt   +upstreamnt  +downstreamnt
atgaacatagaagtcagtcccatcccaaagctgtacccagtcgcagaggtcttcccatgg
aatgagttctcctacacaccccgtctgagccccacagagccccacgacacagacggatgg
ctctccgctctgcctgccttccacaatcatcatccaccctatcccatctgtgagagaatg
cagcagagtggcacccaatgctctgctccagaggagagcggcaagaccgccacagaccct
ggagaggctcagctggacttctaccgtaaactgggctactccccagcgcaggtccagacc
gtgctgcagaagtttggcctgaacacagacactaacaggattctgggggaactggtgcag
actggagccagcccagaagggatggagaaggagggagccccaactaccatgtctgtcctg
attgctagaggggagacccttagtagcctgcccctcacccctccaccaatttgggaggat
gcagccagtgaggaggaagatgacctgaaacccatagtgatcgatgggagtaatatagct
atgagccacggaaacaaggaagtgttttcctgcctgggaatccagctggctgtgaacttc
ttcctggacaggggtcatactgatatcactgtgtttgttccctcatggaggaaggagcag
cccagaccagatgtctccatcacagatcaacacattttgcgtgagctggagagaaagaaa
atcatggtgttcaccccttcgcggcgtgtagcgggcaaacgtgtggtctgctacgatgat
cgcttcatcgtcaagctggcgtacgagtcagacggtgtcatcgtatccaacgacacatac
cgtgaccttcagggcgagagacaggagtggaagcgcttcatcgaggagaggctgctcatg
ttctcgttcgtcaatgacaagttcatgccccctgatgaccccctgggtcgccatggtccc
accctggagaactttctacggaaggttcctcggttaccacgcaaacagccatgtccttac
ggaaggaaatgcacatatggaataaagtgtaaattctaccacccggagcgagtcaaccaa
tccaatcgctctttggctgacgagctgcgggagaaggccaagctgcccttgtcacaacag
aaacaccccaccacaggtcctggacttgcctatggcctttccctggaggagcagatggct
cagaaactgaccctagaacagtggaatggctccttgaagaaaggcctcaccagtgagaat
gttcttcttctcaagggaggtcatcgctccagctggacgtccccagctaagaaggccagc
accaaccgacattccctgaccgacctggactcggccctggccagtggctctcaagagagg
ctagattctgggctgggctccttcgagagccaggcatctgacccctctagaaaccactgt
gatcactatagcaacgctgggtacaggaactgccagtcaaagtccgcccccagtatgaaa
caacaacgctattctctccctagcgacccgccttgtaactgctgctcccatgctcctcag
ccttcaggccccagtgcaggataccaacaacaccacagcccacaccatagcatgggccca
gccagcacccacaacccagacatgatgacctactaccccccttgttaccccaactatgga
acaccaatgtatccagttagtatgcatcagtatagccaccccagtgacttccaacagcag
ggcagggtccaccgttcacagcagaccttctggtcggacccgtttgggacttatcctcag
actctccattgcattgctcaggtggagcagcagagacactggtcccctgcccggacacag
ccgagcccccatggggagtgcagggagagggaggatgtcaggaagaagctgctggccatc
tttaacggccgtctggtggacagggccatggacatgttcccccatctcatggacccacag
agactggctgctgagatcctcaccctgagatcctctcagggcctgtga

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