Oncorhynchus mykiss (rainbow trout): 110488109
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Entry
110488109 CDS
T07259
Name
(RefSeq) iroquois-class homeodomain protein irx-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110488109
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
110488109
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
110488109
NCBI-ProteinID:
XP_021415806
Ensembl:
ENSOMYG00000022785
UniProt:
A0A8C7RDX9
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Position
32:complement(22786417..22790358)
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AA seq
457 aa
AA seq
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MSFSQLGYSQFLSGSQEVYGGDLAGLGRDGAADGGVNQAATAAAVSSMLGMYGNPWAAQN
YSAFLPYSGADLALISQMNPQYDLKDSPGAHPGGLAVHASAGFYPYGQYGYGDPNRAKAA
TRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKVTWG
RSAEDRDGRIFSSDNEDEPEKHGSEDEEEEEIDLESIDIDKVEENPGDQREVEGEGKLAA
RDSSDSGSLESQRTMSVKALRSMEGPISLIKAPVGACKNAVDLSPNAPVCQRPPQNKPKI
WSLAETATSPDSSIKPSPAVSIPHQATIPSHHPALLPGHGIYTCQIGKQLHNWANAAFLS
ANSLLGVRSLLGAANPAGHHMPLHGALNHQDARLTQASGASCTEEESGDESLESFSPKRD
DDVNIRRSGSPKSPFQLITDRSHHGTAQRALSTISTI
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctcgcagctggggtactcccagtttctaagtggctcccaggaggtttacggg
ggcgacctggccggcttaggccgggatggagccgcggatggcggcgtgaatcaggcagct
actgccgctgctgttagctcgatgctggggatgtatggtaacccgtgggcggctcagaac
tacagcgcgtttctcccctacagcggtgcagacctcgccctcatatcgcaaatgaaccct
cagtacgatctgaaggacagcccaggagctcacccgggaggtctggctgtccacgccagc
gcagggttctacccatacggccagtatggctatggcgacccgaaccgagccaaggccgct
acgagggagaccaccagcactctgaaggcctggttgcaggaacaccagaagaacccatac
cccaccaagggagaaaagatcatgctggccatcatcaccaagatgacactcacacaggtg
tccacgtggttcgccaacgcgcgccggcgtctgaagaaggagaacaaggtgacgtggggc
cgcagcgcggaggaccgggatggacggatcttcagcagcgacaatgaggacgagcctgaa
aaacacgggagcgaggatgaagaggaggaagagatcgatttagaaagtatcgacatcgat
aaagtcgaggagaacccaggagatcagagggaagtggagggagagggcaagctggccgcc
agggactcatctgattctggtagcttggagagccagaggacgatgtctgtcaaggccctc
agaagtatggaggggcctatttctctcattaaggctcctgttggtgcttgtaaaaacgct
gtggatctttcccccaatgcaccggtgtgtcagaggcccccacagaacaaacccaaaatc
tggtctctggcggagacggccacaagccccgacagttccatcaaaccttccccggctgtc
tcgattcctcaccaggccacgatcccgtcccaccacccggccctactcccgggtcatgga
atatacacatgccagatcgggaagcagctccacaactgggccaacgcggcgttcctcagc
gccaactctctgctgggtgtcaggtcgcttctcggcgcggcaaacccagccggacaccac
atgcctctccatggcgcgctgaaccatcaggacgcacggttgacgcaggcctcaggggca
tcgtgcacagaggaggagagtggagatgagtcgttggagagcttcagtccaaagcgagat
gatgacgtgaatattcgcaggtctggctcgccgaagtctcccttccagctgattactgac
agatctcaccacggaacggcgcagcgggccctctcgacaatttccacaatatga
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