Oncorhynchus mykiss (rainbow trout): 110488157
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Entry
110488157 CDS
T07259
Name
(RefSeq) thyroid hormone receptor beta isoform X4
KO
K08362
thyroid hormone receptor beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04080
Neuroactive ligand-receptor interaction
omy04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110488157
04081 Hormone signaling
110488157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110488157
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110488157
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110488157
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
110488157
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
110488157
NCBI-ProteinID:
XP_021415906
Ensembl:
ENSOMYG00000004119
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Position
32:24797318..24915300
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AA seq
416 aa
AA seq
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MSEQGDKCTTPRWKHEAMQNGYIPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRT
IQKNLNPTYACKYEAKCIIDKVTRNQCQECRFKKCITVGMATDLVLDDSKRLAKRKLIEE
NRERRRKEEFQKTVWDRPEPSQEEWDLIRMVTEAHMSTNAQGNHWKQKRKFLVEEAMLLN
EITCNLFYTSDQSAVGVKETKPEDIGQAPVINAPEGSKVDIEAFSQFTKIITPAITRVVD
FAKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGG
LGVVSDAIFDLGLSLSSFHLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEH
YINYRKHKVAQFWPKLLMKVTDLRMIGACHASRFLHMKVECPNELFPPLFLEVFED
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcaccaccccccgctggaaacatgaggccatgcaaaat
ggatacatccctagttacctggacaaggacgagttatgtgtggtatgtggggacaaagct
acaggatatcactatcgctgtatcacctgtgaaggatgcaagggtttcttccggcggacg
atccagaagaacctgaacccaacgtacgcgtgtaagtacgaggcaaagtgcatcatcgat
aaggtgaccaggaaccagtgccaggagtgtcgcttcaagaagtgcatcactgtcggcatg
gcaacagacttggtgctggacgacagcaagcggctcgccaagcggaagttgatcgaggag
aaccgtgagcggcggcggaaggaggagttccagaagacagtgtgggaccggcctgagccg
tcccaggaggagtgggacctgatccgcatggtcaccgaggcccacatgtcaactaacgcc
cagggcaaccactggaaacagaaacgcaagttcttggtcgaggaagcaatgctacttaat
gaaataacatgtaatttattctatacttctgaccagagtgcagtgggggtgaaggaaacc
aagcccgaggacattggtcaagcgccggtcataaatgcacctgaagggagcaaagtggac
attgaagccttcagtcagtttacaaaaattatcacccccgccattacccgagtggtggac
tttgccaaaaagctgcctatgttctgtgagctgccttgtgaagaccagattatcctattg
aaaggctgctgcatggagatcatgtctttacgggcggccgttcgctacgaccccgagagt
gagacgctgacgcttaacggggagatggccgtgacccgcggccagctgaagaacggaggc
ctgggtgtggtgtcggacgctatctttgatttgggcttatcactgtcttcgttccacctg
gacgactctgaggtcgctctgctacaggccgtcatcctcctgtcctccgaccgtccgggg
ctgaccagcgtggagcgtattgagcgctgtcaggaggagttccttctggcctttgaacat
tacatcaactaccgcaaacacaaggtggcgcaattctggcctaagctgctgatgaaggtg
acggacctgcggatgatcggggcgtgccacgcctcccgcttcctgcatatgaaggtggag
tgccccaacgaacttttccctccactcttcctggaggtctttgaggactga
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