Oncorhynchus mykiss (rainbow trout): 110488225
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Entry
110488225 CDS
T07259
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110488225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110488225
03036 Chromosome and associated proteins [BR:
omy03036
]
110488225
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
110488225
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
110488225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
P66_CC
GATA
LIM
Motif
Other DBs
NCBI-GeneID:
110488225
NCBI-ProteinID:
XP_021416035
Ensembl:
ENSOMYG00000003501
LinkDB
All DBs
Position
32:29169839..29215141
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AA seq
670 aa
AA seq
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MERMSEEALRLNLLKRGLETSEEREEALAKRLKMEGHEAMERLKMLALLKRKDLAALEGA
AAVAAGSLDGSKGGPGGSRHHHQSMLAGAAAAYEEKMNGRLGGHGGPSKNGKENMVDEPV
DFSARRGDVDRERHTPSPDVIILSDNEASSPRGTPHPGERLHQANLEIFKGKNGDERQQM
IKALREELRLEEARLVLLKKLRQSQIQKENVVQKVPVVQNSPSSVQPSPIHSSQGMGKLP
VRPGMHTPEPQNLRTAQGHTVIRSGANASLPPMMMSQRVIAPNPSHLQGQRMPSKSGMSR
SSTGSMSNVSYQQASSQQVTASQRSGSSAIYMNLAHMQAAAGGVAGVGMGSGGMGAVSPS
TMSSGTGGGGSSGVSSLADQASSQAAAKLALRKQLEKTLLEIPPPKPPAPLLHFLPSAAN
SEFIYMVGLEEVVQSVIDSQGKLRGALSRMEPFFCAQCRIDFTPHWKQEKGGRILCEQCM
TSNQKKALKAEHTNRLKNAFVKALQQEQEIEQRLQQQAALSPSTAPTVPNVGKAETMIRH
HALRQAPQPQASMQRGLSSSARGVLSNFAQASQLSVASGLLGMTGKQRCGGGGGGTSGGG
GSSRIQHDGRRQIYNIPGGFLRTPYGLNIAYLNQGGVGANKGSSLADRQREYLLDMIPPR
SISQSINGQK
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctgaggctgaacctgctcaagcggggcttggagacg
tccgaggagcgtgaagaggccctggccaagcgcctcaagatggagggccacgaggctatg
gagcgcctcaagatgctagccttgctcaagcgcaaggacctggccgcgttggaaggggcg
gcagcggtggctgccggatccctggacggcagcaaaggggggccgggggggagccgccac
caccaccaaagtatgctggcaggcgcagcggcggcctatgaggagaagatgaacgggagg
ctggggggccacggaggccccagcaagaatggcaaggagaacatggtggacgaaccagtg
gacttcagcgccagaagaggcgacgtggaccgcgagcgacacactccgtccccggacgtg
atcatcctgtcggacaacgaggcttccagtcccagaggaacgccccaccccggagagagg
ctgcaccaggccaacctggagatcttcaaggggaagaatggcgacgagcgacagcagatg
atcaaggctctgagggaagagctgcgtctggaggaggcccgtctggtgctgctcaagaag
cttcggcagagccagatccagaaggagaacgttgtgcagaaggtacctgtggtccagaat
agcccctcttcggtgcagccgtcccccatccacagttcacaggggatgggaaagctgccg
gtgcgccctggcatgcacaccccggagccccagaacctccgcactgcacagggtcacaca
gtcatcaggtcgggggccaatgcctccctgcccccgatgatgatgtcccagagggtcatc
gctcccaacccgtcccatctgcagggccagagaatgccctccaagtctggcatgagccgc
tctagcacgggcagcatgagcaacgtcagctaccagcaggcctctagccagcaggtgacg
gcgtcccagcgttcgggctcctctgcaatctacatgaacttggcccacatgcaggcggcg
gctggtggcgtggccggtgtggggatgggcagtggcgggatgggcgctgttagcccttcc
accatgtcgagcggcacaggtggcggcggcagctccggcgtgagttccctggcggaccag
gccagcagccaggcggcagccaagctggccttgcgcaaacagctggagaagaccctgctg
gagatcccgccgcccaagccaccagccccactcctgcacttcctgccgtcggcggccaac
agcgagttcatctacatggtgggcctggaggaggtggtgcagagcgtcatcgacagccag
ggtaagctgcggggggcgctgtcacgcatggagcccttcttctgcgcccagtgcaggatc
gacttcaccccacactggaagcaggagaaaggcgggcgtatcctctgcgagcagtgcatg
acgtccaatcagaagaaggccctgaaggcggagcacaccaataggctgaagaacgcattc
gtcaaggccctgcagcaggagcaggagattgagcaaaggctccagcagcaggcggccctc
tcccccagcacggctccgactgttcccaacgtcggcaaggctgagaccatgatccgacat
cacgccctgcgtcaggctccccagcctcaggcctccatgcagcggggtctctccagctcg
gcgaggggcgtcctctccaacttcgcccaggcctcccagctctccgtggccagcggcctg
ctggggatgacggggaagcagcgctgtggaggtggtggtggcggaactagtggcggcggt
ggcagcagtcggatccagcatgatggccgccgccagatctacaacatccccggtgggttt
ttgagaaccccttatgggttgaacattgcctacctgaaccaaggaggggtcggggccaac
aaaggctccagcttagcggaccgccagagggagtacctgttggacatgatcccgccacgc
tccatatcacagtccatcaacggacagaaatga
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