KEGG   Oncorhynchus mykiss (rainbow trout): 110488229
Entry
110488229         CDS       T07259                                 
Name
(RefSeq) thrombospondin-3b
  KO
K04659  thrombospondin 2/3/4/5
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04145  Phagosome
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110488229
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    110488229
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110488229
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110488229
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:omy04131]
    110488229
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110488229
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    110488229
Membrane trafficking [BR:omy04131]
 Endocytosis
  Phagocytosis
   Opsonins
    110488229
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   110488229
  Exosomal proteins of colorectal cancer cells
   110488229
  Exosomal proteins of bladder cancer cells
   110488229
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   110488229
SSDB
Motif
Pfam: TSP_C TSP_3 COMP EGF_CA cEGF EGF_3 EGF_MSP1_1
Other DBs
NCBI-GeneID: 110488229
NCBI-ProteinID: XP_021416042
Ensembl: ENSOMYG00000004157
UniProt: A0A8C7NJ50
LinkDB
Position
32:complement(29283078..29318812)
AA seq 955 aa
MDMVRFVLHLLLASAAVLLGLTRASEMQVIDMLELHDARQSASAVGKMSGALGFVSDLYL
VSTLRLPPKLGGVLLGVYNKGDNRKYLEVALMGKVNKVLVRYVREDGKLHTVNLQNPGLS
DGRTQSLLLRVGGLQRNHLHMELYVNCRLADSAQVLPSMVQLPAEAESVEIRNGQKAYAR
LQGSVDSLKLALGGSIAKAGILTDCPFQGDTHFQNSVSADVNAILGDHTKALIGQLIIFN
QILGELREDIREQVKEMSLIRNTILECQVCGFHETHSRCEPNPCYKGLACTETREYPGYR
CGACPDGMTGNGTHCQDIDECALARPCFSPEGCVNTAKGFTCEPCPVGFSGPLLSGLGVE
FAKSHKQKCRDVDECADLYKACVPNSVCINTEGSFRCGPCKESFVGNQTVGCFLRRSCAT
LGFNPCDVNAHCVIKGAARVSCECNVGWAGNGHTCGPDTDIDGYPDQPLPCIDNDYHCRA
DNCVNTPNSGQEDADGDGIGDQCDEDADGDGIKNMEDNCRLVPNKDQQNSDTDSYGDTCD
NCPNVSNGSQKDTDGNGAGDTCDNDIDGDGIPNVLDNCPKVPNPMQTDRDGDRVGDACDS
CPEVNDPMQSDADNDLVGDVCDTNQDMDGDGHQDSRDNCPDVPNSSQLDSDNDGIGNECD
DDDDNDGIPDARPPGPDNCRLIPNPSQTDTNGNGVGDMCENDFDNDSVIDLIDVCPESAE
VTMTDFRNYQTVILDPEGDAQIEPKWIVLNRGMEIVQTMNSDPGLAIGYTAFNGVDFEGT
FHINTATDDDYVGFIFGYQDSSSFYVVMWKQTAQTYWQSLPFRAMAQPGLQLKAVKSRTG
PGEYLRNALWHTGDTPGEVTLLWKDPRNVGWRDKTSYRWHLSHRPQMGYIKVRLYEGMTL
VADSGVLVDTSMRGGRLGVFCFSQEQIIWSNLGYRCNDTVPEDYEFYRKQIHIRV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atggatatggtgaggtttgtgctacatttgctgcttgcgagcgcggcggttctcttgggc
ttgaccagggcttcagaaatgcaagtgattgacatgctggagcttcacgatgccaggcag
agtgcgtccgcggtggggaagatgtcgggggctctgggcttcgtgtcggacctttacctg
gtgtcaactcttcgtctgccgcccaaactgggaggagtgctgttgggagtctacaacaaa
ggcgacaacaggaagtacctggaggtggccctcatgggcaaggtcaacaaagttctggtg
cgctacgtacgcgaggatggtaaactacacactgtgaacctccagaaccccggcctctcc
gatggacgcacccagtcactcctcctccgtgtgggtgggctccaacgaaaccacctccac
atggaactctatgtcaactgccgattggctgactcagcacaggtcctgccatccatggtc
cagctcccagctgaggcagagtctgtggagatacgcaacgggcagaaggcctatgccagg
ctacagggctcagtggactctttgaaactggctttgggtggctccatagccaaagcagga
atccttaccgactgtccgtttcagggagatacacattttcagaattcagttagcgccgat
gtcaatgccattctgggtgaccacaccaaggctttgattggccagctgatcattttcaac
cagattcttggcgaactccgagaggacatcagggaacaggtaaaggagatgtctctgatt
aggaacactatcctggagtgccaagtgtgtggcttccacgagacccactctcgctgcgag
cccaacccctgctataagggcttggcctgtacagagaccagggagtacccagggtaccgt
tgtggtgcctgcccagacggcatgacggggaatggcacccactgccaggacattgacgag
tgtgctctagcccggccctgtttctcgcccgagggttgcgtaaacacggcaaagggcttc
acctgtgaaccatgtcccgtcggcttctccggacccctccttagcgggcttggggtggag
tttgccaagagccacaagcagaagtgcagagatgtggatgagtgtgctgacctctacaag
gcctgtgtgccgaactctgtctgcatcaacacagagggctcgttcaggtgtggtccatgt
aaggagagctttgtaggcaaccagacggtgggctgtttcctgcggaggtcctgcgccacg
ctgggcttcaacccctgtgacgtcaacgcccactgtgtcataaagggtgctgccagggtc
tcctgcgagtgtaatgtgggctgggcaggtaatgggcatacatgtggcccagacacagac
attgatggctaccccgaccaacctctcccctgcatagacaatgactatcactgccgagcc
gacaactgtgtgaacacgcccaactctggccaggaggacgcagacggagacggtataggt
gaccagtgtgatgaggatgcggacggagacggcatcaagaacatggaggacaactgccgt
ctggtccccaacaaggatcaacagaactcggacacagactcgtatggggacacgtgtgac
aactgccccaacgtttccaacggaagccagaaggacacagatggaaacggggctggggat
acctgtgacaatgacattgatggggatggtatcccaaacgtgctggacaactgtcccaag
gtgcccaaccctatgcagactgaccgtgacggggatcgagtgggggacgcttgtgacagc
tgcccggaagtcaacgaccccatgcagtctgatgcagacaacgacctggtgggagatgtg
tgtgacaccaaccaggacatggatggggacggccaccaggattcaagggacaactgtcca
gacgtccctaacagctcccagctggactcagacaatgacggcatcggcaacgaatgcgac
gatgacgacgacaacgatggcattccagatgcgagacctcccgggccggataactgtcgt
ctcatccctaaccccagccagacagacactaatggaaatggcgttggtgacatgtgcgag
aatgactttgacaacgactccgtgatagacttgattgacgtgtgtccagagagcgctgaa
gtcacaatgaccgacttcagaaactatcagacggtcatcctggacccggagggcgatgcc
caaatcgaacccaagtggattgtgctcaatcggggtatggaaattgttcaaaccatgaac
agtgaccctggtttggccataggctacacagcctttaacggggtagactttgaagggaca
ttccacatcaacacggccacagacgatgactacgtgggcttcatcttcggttaccaggac
tcgtccagcttctacgtggtcatgtggaaacagacggcgcagacctactggcagtcgctg
ccttttagggccatggcccagccaggcctgcaactaaaggcagtgaagtcacgtacgggt
ccaggcgaatacctccggaacgccctgtggcacacgggcgacaccccaggcgaggtcacg
ctgctgtggaaggacccccggaatgtgggctggagggacaagacatcctaccgctggcac
ctcagccaccgcccgcagatgggctacatcaaagtgaggctgtatgaaggcatgacattg
gtggcagactcgggcgtgctggtggacacctcaatgaggggtgggaggctgggcgtcttc
tgcttctcccaggagcaaatcatctggtccaacctgggctatcgctgcaacgatactgta
ccagaggactatgagttctaccgcaagcagatccacatcagggtgtga

DBGET integrated database retrieval system