Oncorhynchus mykiss (rainbow trout): 110488308
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Entry
110488308 CDS
T07259
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
110488308
NCBI-ProteinID:
XP_036827590
Ensembl:
ENSOMYG00000018750
UniProt:
A0A8C7QPN4
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Position
32:32220923..32353844
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AA seq
1043 aa
AA seq
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MVPLERTRWRLLLAALTLTSCLLSTSATAPPFPKDLEPINVVRWEHSYLYPGFQGLVSDN
DTIRLGLDFQRMLRINHMLYIAARDHVFAVNLTTAGDDFVPQLKLTWRSKDVAKCTVRGR
NSDECYNYVKVLVPRNDETLFACGTNAFNPTCRNYKMTTLEQVGEEVVGQARCPFESGQS
NLGLFAGGDFYSATMTDFLASDAVIYRSLGDDSPVLRTVKYDSKWLREPHFHHAIEYGNY
VYFFLSEIAVEYTTLGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGDSFF
YFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKAFNGKFKEQKTSDS
AWTPVPEEQVPKPRPGSCAGDGLASAYKSSTTFPDDTLTFIKSYPLMDEAVPSVNDRPCF
TRTTSRYKLTQIAVDTSAGPSKDRTVVFLGSEDGRVLKVLSSTHPNASFGSQLLEDIDVY
NPSMCNIQGQEDRRILGMELDKDHHALFVAFTSCVIRVPLSRCTEHGACKKSCLSSRDPY
CIWLRTGSCANMAPGFKAGFEQDIEGDHSLYPENCLADVLATKRNQNPAADSAYGVRRLP
DMEKSSPSVHYTLLIACVLVAFFLGAILSGFLVSCYCSHNARRAHRLGKDPEASLHPALS
LRSLAKLNGLLDGQPKEEKLDVSTPKMYSSFVPNGKEHTPGRHGMSLGDPDLNLSQGENL
SGLPTPDSTPELPIKNMKAFRNQWERNQNCNNAKESKAPPGTGFGLGSSRSSSGVTQQVF
PFSHSLTNGQALGHLPEERKIPNDERAKGASASQSSSCYPQTVVDVAALDELLKHIHEVS
ASGSHSITVLTSPCAPLPGSSSSSHNHSHSQSSFRSQPQIPETESAQYYSSSTLPRDSLT
RRLDVPPDAAAASPLQQQSIPERSSVTRHHSQRHLMIKMGNGGAVPRQHSFRQGGVGPPP
HQLLTRINSGGGGGSGGGGVGFEAHRPLIPSACLTRQHSYSEPPHLHRAAIVRRTASLKP
QVPPKPLFLPATSPVNEQGNYNY
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggtccctctggaacggacgaggtggcgcctcctgctggcagccctcacactcacttcc
tgtctactgtccacctcagccacagccccgcccttcccaaaagacctggagccaatcaac
gttgtccgatgggagcactcctacctgtacccagggttccaggggctggtgtcggacaac
gacacaatcagactaggcctggacttccagaggatgctgaggatcaaccacatgctctac
atcgctgccagggatcatgtttttgcagtaaacctgaccacagctggtgacgacttcgtc
ccccagctgaagctgacatggaggtccaaggatgtggccaagtgtaccgtgagaggtaga
aacagcgatgaatgctacaactatgtcaaagtgctggtaccgcggaacgacgagacccta
tttgcttgcggcactaatgccttcaaccccacctgccgtaactacaagatgaccaccctg
gagcaggttggcgaagaggtggtgggtcaggcgcgctgtcccttcgagtcgggtcaatcc
aacctcggcctctttgctggcggtgatttctactctgccaccatgaccgacttcctggcc
agcgacgctgtcatctatcgtagtcttggcgacgacagccccgtcctgcgaaccgtcaag
tacgactccaagtggctccgagagccccatttccaccatgcgatcgagtatggaaattat
gtctactttttcctcagtgagattgcagtggagtacaccacactgggcaaggtggtgttc
tctcgtgtggcgcgggtgtgtaagaacgacaatggcggctctcctcgggtgctagagcgc
tactggacctccttcctgaaggcgcggctcaactgctcggtgcccggcgactcgttcttt
tacttcgacgtgctgcagtcgctcaccaacgtgctacagatcaaccagcgccccgcggtg
gtgggagtgtttactacgcaagctaacagtatccctggctcagcagtgtgtgccttctac
atggatgacatagagaaggcctttaatgggaagtttaaggagcagaaaaccagtgactca
gcctggaccccagtaccagaggaacaggtgcccaagcctagacctggttcctgtgccggt
gacggcctggcctctgcctacaagtcgtccaccaccttccccgacgacacgttgaccttc
atcaagtcttaccctctgatggacgaggcggtgccctccgtcaacgaccggccctgcttc
acccgcaccaccagcaggtacaagctgactcagattgcggtggacacctctgccgggccg
tctaaagaccgcactgtggtcttcctgggctcggaggatggcagggtcctgaaggtgttg
tccagcactcatcctaacgcctcctttggctcccagctcctggaggacatagatgtgtat
aacccctcaatgtgtaacattcaggggcaggaggaccggaggattctgggaatggagctg
gataaggaccatcatgccttgttcgtggccttcaccagctgtgtcatcagagtaccactc
agccgctgcactgagcacggcgcctgtaaaaagagttgtctgtcatcccgcgacccgtac
tgcatctggctccggaccgggagctgtgccaacatggcgccagggttcaaggctggcttt
gagcaggatatcgagggagaccactcgctgtaccctgagaactgccttgcagatgttctg
gcgaccaagcgaaaccagaaccccgcggcagactcagcctacggtgtccgaaggctccct
gacatggagaagtccagccccagcgtccactacaccctcctgatcgcctgcgtcctggtt
gcctttttcctcggtgccatcctctccggcttcctggtgtcatgctactgcagtcacaat
gcccgccgtgcccaccggcttggcaaggaccctgaggcatccctccaccccgccctctcg
ctgcgcagcctggccaagctaaatggcctgctggacggccagccgaaagaggagaagctg
gatgtgtctacgcccaagatgtacagctccttcgttcccaacggaaaggagcacactccg
ggcaggcacgggatgtccctgggagaccctgaccttaacctctcccagggggagaacctc
tcgggcctacccacccctgactccaccccggagctgccgatcaagaacatgaaggccttc
cggaaccagtgggagaggaaccagaactgcaacaacgcaaaggagtctaaggcaccgcct
ggcaccggtttcggcctgggttcgtcgagatccagctcgggggtcacccagcaggtgttc
cccttctcccacagcctgaccaatggccaagccctcgggcacctgcccgaggagaggaag
atccccaacgacgagcgtgcaaagggggcttcggcctcccagtcctcctcctgctacccg
cagacggttgtggatgtggcggccctggacgagctcctcaagcacatccacgaggtcagc
gcctcaggcagccacagcatcactgtgctgacctcaccgtgtgctcccctgccgggtagc
tccagctccagccataaccacagtcacagccagagcagcttcagatcccagccccagatc
cccgagactgagtcggcccagtactacagctcctccaccctgcccagggacagtctgacc
cgccgcctggacgtgcccccagacgctgctgccgcctccccgctgcagcagcagtccatc
cccgagcggagctcagtgactcgccaccactcccagaggcatttaatgatcaagatgggc
aacggaggggccgtcccgcgccagcacagcttcagacagggcggggttgggccaccaccc
caccagctgctcacccggatcaactctggaggtggtggtggtagcggcgggggaggggtt
ggctttgaagcccaccggccactcatccccagtgcctgcctgacacggcagcacagctac
agcgaaccgccccacctccaccgcgccgccattgtacgccgcactgcctccctcaagccc
caggtaccccccaagcccctcttcctgcccgccacttcgcccgtaaacgagcaaggcaat
tacaactactga
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