Oncorhynchus mykiss (rainbow trout): 110488318
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Entry
110488318 CDS
T07259
Name
(RefSeq) F-actin-uncapping protein LRRC16A isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110488318
Membrane trafficking [BR:
omy04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
110488318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
PBP-Tp47_c
Motif
Other DBs
NCBI-GeneID:
110488318
NCBI-ProteinID:
XP_021416189
Ensembl:
ENSOMYG00000019796
LinkDB
All DBs
Position
32:complement(32541010..32567283)
Genome browser
AA seq
1384 aa
AA seq
DB search
MSEEDTGIPKELLESLRDAVGRKIKLTLKKRLKLEVKGDKLENRVLALASHRVFLLTARV
PAKIEQTFNYLDIQGIISNKPTQLLLEYDRGQLSLKLGSVDDVDEVVAHIGSCLHRICPG
LSPAKAMKKLTLKPPERTAALQSLWEDQATTDLGPCGGFSHMYWCLCDQLGLPFREEVQW
DVDTIYQTQDTRELNLQDFVHLDNRDLVAIIVVLEYNQWFTKLSIKDYKLSTDVCEQILR
VVARSSRLEELVLENAGLRSDFVQKLANALTCNPASALHTLNLTNNSLEDKGISALSAQL
AKLPMGLKHLNLSKTSISQKGVNSLSQALSANPAVPTTLTHLDLCGNSLRGDDLSNLYNF
LGQHNSLVTLDLSSSDCCLDQVCTSLLRGSLKHLSVLNMSKSVFSHRRSKDVPHSFKQFF
GTALALSSVNLSGTKLPLEALKALLLGLGCNPNLSEVSLDLSSSELRSGGSQILEGCIAE
IPNISSLDISDNGLDSDLTTLLVWLAKNRSIRHLSLGKNFNNIKSKNLSQVLDNLVHMIQ
EEESPLTSLSLADSKLKGDLSIVLNALGSNTSLIRVDISGNGMGDMGAKMLAKALQINTK
LRTVMWDKNNVSLQGLQDVAAALEKNHTIRFMPIPIIDAAQALKASPEKTEDALLKMEQY
LLRNHETRKYLQEQAYRLQQGIVTTTTQQMMDMICVKVQDHLNSLRYTETDVVQEDMKVA
KNLMKDARNSKRLLPNLYHMRGSPGGMGSPIQDKLESMAGEIARVMDGQLQTLLQSMVDT
AEGLCPHVMKRSNLHQELMKAGAGRMTIPHSFITTTLLEQSGVDIINKISEVKLSMASFL
SDRIVDEILESLSRSQNTLAEHLTRKPQPLLHQEPNKMEVLEETVLQPEAQTQEQSPHHA
ERLEEMDTCVSKRKSILCRMLRPVSVAFGEFMFYIPEMEFDLDKALEEVPIYEEDPPPPA
PSDKKPTYFGELPTMEARKLEHHTKLRPKPKKRTKPSRAPREPICTSPPPEVEQNDLLGK
VDEGVDEFFYKKITKLSFKRPTLRGSSNIQEGSEKKRESRKSGFLNLIKSRTSKSEKSHG
TAAITTQAAATVSTVTEKPLSPNAPLWDHSEISPDHSRKPPTPEPTEEQHSESDSKGSPH
GGRHFGVPVMGPLMGMDLLAEMRKMHEKIVAHKSDSSDKADDKKGKPKGQTLSIAPRSKP
TGVTPRSPAPQSIKPHMGPHTLGPLSPRASSSHSPDDTPDSCLGNVSPKGPLPAPHLKRE
PSDYEREEESSHINVELTGDSSPFDLDQEMDRSAIGGRQWSSLKRSTSVVQEVEGRERTK
SLPASVRPSSTVDLVHCQSPGVFAKDNTEEDFSPTPDTDQRQDLRPDNMEDTMTTSQFRK
KSYI
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagatacgggtattcctaaggagttgctggagagtctgagagatgccgtg
ggaaggaagatcaagctcaccctgaagaagaggttgaaactggaggtcaaaggtgacaaa
ctggagaaccgagttctggctttggcatcccatcgggtctttctgcttactgcaagggtc
cctgccaagattgaacagaccttcaattacctagatatacaggggatcattagtaacaag
cccactcagttgttgttggagtatgaccgaggccagctgtccctgaagcttggctctgtg
gatgatgtggatgaggtggtggcccacattgggagctgtctacacagaatctgtccaggc
ctctccccagcgaaggcgatgaagaagttgaccctgaagcctcctgagaggacggccgcc
ctacagtctctctgggaggaccaggccaccacagacctagggccgtgtggtggtttctcc
cacatgtactggtgtctctgtgaccagctgggtctgccattcagagaggaggtgcagtgg
gatgtggacacaatctatcagacccaggacaccagggaactgaacctgcaggatttcgta
catcttgataaccgagatttggtggccatcattgtggtcctggagtataaccaatggttc
accaagctctccataaaggactacaaactgtccacagatgtgtgtgaacaaattctgcga
gttgtggcccgctccagtcgcttagaggagctggttttagagaatgcaggtctcagaagt
gatttcgtgcagaagctagccaatgctctgacctgcaaccctgcctctgcacttcacacc
ctcaaccttacaaacaactctctggaggacaagggcatatctgctctcagtgcacagctt
gccaaactcccaatgggtctcaagcatttgaacctttcaaagacctccatatcgcaaaaa
ggggttaacagtctgtcccaggcgctgagtgccaaccctgctgtccccactaccctcaca
cacctggacctctgtgggaactcactccgaggagacgacctctcaaatctgtacaatttc
ctgggtcaacataacagtctagtaactctggatctgtccagcagtgactgctgtctggac
caagtctgcacttcacttctacgaggttctctcaagcacctctcagtgctcaacatgtcg
aagagtgttttctctcacaggagaagtaaagatgtcccgcattccttcaagcagttcttt
ggcactgcactggcgctgagcagtgtcaacctgtctggaaccaagctccccctggaggca
ctcaaagcacttttactaggtcttggttgcaatcctaatctcagtgaagtatcactggat
ctcagcagctctgagctaagatctggaggctctcagattctggagggctgcatagctgag
attcccaacatctccagcctggacatctcagacaacggtttggattcagacctgaccact
ctcttggtgtggctggccaaaaatcgctccatccgccacctctcactgggcaagaacttc
aataacatcaaatccaaaaatttgtctcaagtcttggacaacctggtgcacatgatacag
gaggaggaatcgccactgacgtccctctccctggccgactccaagctgaagggagatctg
tccatcgtgctgaacgctctgggcagcaacaccagcctgatccgggtggacatcagtggc
aacggcatgggagacatgggggccaagatgctggccaaggccctacagatcaacaccaag
ctccggacagttatgtgggacaaaaacaatgtcagcctacaaggcctccaggatgtggca
gctgctttagaaaagaaccacaccattcgcttcatgcctatccccatcatcgatgctgcc
caggccctcaaggccagccctgagaaaacagaggacgccctactaaagatggagcagtat
ctcctaaggaaccatgagactcgaaaatacctccaagagcaagcttaccggcttcagcaa
ggcattgtcacgacaaccacacaacagatgatggacatgatctgtgtaaaggtgcaggac
cacctgaactccctgaggtatacagagaccgatgtcgtccaggaggacatgaaggtggcc
aagaacctcatgaaggacgccaggaactccaaaagactgctgcccaacctgtaccacatg
aggggatctcctggtggcatgggcagccccattcaggacaagctagagtccatggccgga
gagatagccagggtcatggatggacagctacagacgttgttgcagtctatggttgacacc
gctgagggcctctgtccccatgtgatgaagaggagcaacctgcaccaggagctgatgaag
gcaggtgcaggcaggatgaccatcccccatagcttcatcaccaccacactactggaacag
tcaggagtcgacatcatcaacaagatcagtgaagtgaagctcagtatggcttcctttctc
tcagaccgtatcgtggatgagatcttggaatctctgtcccgttcccaaaacactctggca
gaacacctgaccaggaaacctcaacctcttctccaccaggagcccaacaagatggaggtg
ctggaggagacagtcctccaacctgaggcccagacccaggagcagagtcctcaccatgct
gagaggctggaggagatggacacatgtgtgtccaagaggaagagcattctctgcaggatg
ctgcggcctgtatctgtggcctttggtgagtttatgttctacatcccagaaatggagttt
gacttggacaaggccctggaagaagtgcctatatatgaggaggatccgccccctcctgcc
ccatcggacaagaagccgacttactttggcgagctgcccactatggaggcccgaaagcta
gagcaccacaccaagctccgccccaaaccgaaaaagaggaccaaacctagccgagcacca
cgggaaccaatctgcacctctccaccaccagaagtggagcagaatgacctcctggggaaa
gtggatgagggtgttgatgaattcttctacaagaaaatcaccaaacttagttttaaacga
cccaccctgaggggctcctccaacatccaggaggggtcggagaagaaacgggaatcccgt
aaaagcggcttccttaacctcatcaagtctcgcacctcaaagtccgagaagagccatgga
acagctgccatcaccacccaagctgctgcgactgtcagcactgtgacagagaagcccttg
tcccccaatgctccgttgtgggaccactctgaaatctcccctgaccactcacgaaagccg
ccaacccctgaacccactgaggaacagcactctgagagtgacagtaagggtagtcctcat
ggtggccggcactttggggtccccgtaatgggccccctaatgggaatggacctcctggcg
gagatgagaaaaatgcatgagaaaatagtcgctcataagtcggactcttcagacaaggca
gatgataaaaaaggaaagccaaagggtcaaacattgtcaatagcgcccaggtctaaaccc
accggtgttacacccagatccccagcaccccagagcatcaagccccacatgggaccacac
actttgggacccctgagccctcgtgccagcagcagccacagcccagatgacacccctgac
tcctgtcttggaaatgtatccccaaaaggaccactgcccgcccctcacctgaagagagag
ccctcagactatgagagggaggaggagagtagccacattaatgttgaactcacaggagac
tccagcccatttgacttggaccaagagatggacaggtctgcaattggtgggagacagtgg
tcctccctgaagcgctccacttctgtggtacaggaagtagaaggtcgagaacgcaccaag
tccctccctgcatctgtgagaccttcatccacggtggaccttgtccactgccaaagccct
ggggtgtttgctaaagacaacaccgaagaggacttctctcctacccctgacacggaccaa
agacaggatctcaggcctgacaacatggaggacacgatgacgacatcccagtttagaaag
aaaagctacatctag
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