Oncorhynchus mykiss (rainbow trout): 110488345
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Entry
110488345 CDS
T07259
Name
(RefSeq) antigen peptide transporter 2
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy02010
ABC transporters
omy04145
Phagosome
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
110488345
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110488345
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110488345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110488345
Enzymes [BR:
omy01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
110488345
Transporters [BR:
omy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
110488345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
Rad17
AAA_30
AAA_29
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
110488345
NCBI-ProteinID:
XP_021416240
Ensembl:
ENSOMYG00000024096
LinkDB
All DBs
Position
32:complement(33337177..33343886)
Genome browser
AA seq
724 aa
AA seq
DB search
MMLRTCVFAMAVGLCIDITTFCATGFGASIPKTGPISFDVFGSMLRLWVVAGIRLVILFG
VSLLTLGSIKPVLKRWLAVHCFLAPVYETGQLMLHGSSPESTHGSLGGPSLWLLCTAAAA
AAALFWEKTFPDSSEESHGKEKTQKARVLFMRVLYFYRPDTLLLVGAFIFLSLAVLCEMF
IPFYTGKVIDILASQYKWNDFLTAIILMGLYSLGSSFSAGCRGGLFMCAINSFTSRMKVE
LFGALVKQEISFFETIKTGDITSRLSTDTTKMARAVALNVNVLLRTLIKIVGMLSLMMSL
SWKLTLLMLMETPVTGLLQGVYDNYYLRLTKEVQDSMARANEAAGETVAGIRTVRSFNTE
RSEASHYDHRLMDTHTLKTRRDTVRAVYVLLRRLTALVMQVAMLYYGRLFIQRGQMSTGN
LVSFILYQSNLGTNIRTLIYIFGDMLNSVGAAGKVFEYLDREPQVSTKGTLQPETLTGHV
HFHNLSFSYPTRQERKVLQGFSLELRPGQLTALVGPSGGGKSTCVSLLERFYQPQQGEIL
LDGQPLHSYQHHYLHRKVAMVGQEPVLFSGSIKDNIAYGLADCSLERVQEAARRANAHSF
ISQLEKGYDTDVGERGGQMSGGEKQRIAIARALIREPQVLILDEVTSALDTESEHMVQEA
LASCPSQTLLVIAHRLKTIERADQIILIDQGTVLEQGTHQQLMDRKGGYYKLRERLFTED
DTSH
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatgcttagaacgtgcgtgttcgctatggctgtaggtctatgcattgacataaccaca
ttttgcgccactggttttggcgcatctattcccaaaactggaccaataagttttgacgtt
ttcggaagtatgttgcgtctatgggttgtagcggggattcgattagttatactatttggt
gtatcgctactcacactaggatcgattaaacccgtattgaagcgctggttagcagtgcac
tgtttccttgccccggtctacgagaccgggcaactgatgctgcatggcagttcaccggag
agcactcatggatccttggggggtccaagtttgtggctattgtgtaccgcggcagcagct
gctgcagccctgttttgggagaaaaccttccctgacagcagcgaagaaagtcacgggaaa
gagaagacacagaaggcacgagtgctgttcatgagagtcctctacttctacagacctgac
accctccttttggttggagcgtttatattcctgtcactggctgtcctctgtgaaatgttc
atcccattctatacaggaaaggtgattgacatcttggcttcccagtacaagtggaatgac
tttctcacagctatcatcctcatggggctctactctttgggaagctctttcagtgcaggt
tgtcgaggaggcctcttcatgtgtgccatcaacagcttcacctctcgaatgaaagtagag
ctgtttggggccctggtgaagcaggagatcagcttctttgagaccatcaagacaggtgac
atcacgtccaggctgtccacagacaccactaagatggcccgggcggtggccctgaatgtc
aacgtcctactgaggaccctcattaagattgtgggtatgctgtcgctcatgatgagcctg
tcctggaagctcactctgctcatgctgatggagacgcctgtcaccggcctgctgcaaggc
gtctatgacaactattacctgaggctcactaaggaggtgcaggactccatggccagggcg
aacgaggcagcgggagaaacagtagctggaatccggaccgtgcgaagctttaacacagag
cggagtgaggctagtcattatgaccacaggttgatggacacccacactctcaagaccagg
cgggacaccgtcagggcagtgtacgtgctcctgagaagactaacagcgctggtaatgcag
gtggccatgctgtactatggcagactgtttatccagcgaggtcagatgagcactgggaac
ctggtctctttcatcctctaccagtctaacctgggaaccaacatcaggactttgatttac
atctttggcgacatgctgaactcggtgggggcggctggtaaggtgtttgagtatctggac
agagagccccaggtcagcaccaaggggaccctccaaccagagaccttaactggacacgtc
cacttccacaacctctccttctcctaccccacccgccaggagcgcaaagtactgcagggc
ttctctctggagctgaggccgggtcagctgactgctctggtggggccgtcaggagggggg
aagagcacctgtgttagtctgctggagaggttctatcagcctcagcagggagagatccta
ttggatggacaaccactgcacagctaccagcaccactacctacacaggaaggtagccatg
gtgggccaggaacctgttctgttctctgggtccatcaaggacaacattgcctacggcctg
gcagactgctctttggagagggtgcaggaagctgctcgcagagccaacgcccacagcttc
atcagccaactggagaagggttatgacacagatgtaggagagcggggtggtcagatgtcc
ggtggtgagaagcagcgtattgccatcgccagagctctgatcagagagccacaggtcctc
atcctggacgaggtcaccagcgcactagacactgagagcgaacacatggtccaggaggcc
ctggctagctgcccctcccagaccctgctggtgattgctcacagactgaagaccatcgag
agggcagatcagatcattctgattgaccaaggaaccgtcctggagcagggcactcaccag
cagttgatggacaggaaggggggctactacaaactaagagagagactcttcacagaagac
gacacgtcacattga
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