Oncorhynchus mykiss (rainbow trout): 110488367
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Entry
110488367 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 2-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110488367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110488367
03021 Transcription machinery [BR:
omy03021
]
110488367
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110488367
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110488367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Motif
Other DBs
NCBI-GeneID:
110488367
NCBI-ProteinID:
XP_036827232
Ensembl:
ENSOMYG00000026058
LinkDB
All DBs
Position
32:33735063..33787371
Genome browser
AA seq
696 aa
AA seq
DB search
MFVPLPVPFVFQRTASDFSAWRLKSPLALRSSSDIRMSKPAEDEKPGTDFPGESTDSERN
SPDANDQVQPMKTSPFSLSPSLSNTKSKSEAGPEMTSTHVPPPSQQQTPHPHTQLMLAGS
QLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAHAAAQANQQQQQQQQQQQL
TKQEHAQPQLTLSQPIQLTAQDIQQLLQLQQLVLMPGHHLQSPQFLLPQAQGQQGQQGKW
DLLSLLSTPNLISLPQHQQSQGSLLTTPPRLGLQAQRRHGDGLTSLQRDKSGDGGVTSGA
SAAPMTSVTSGPHGEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYGNDFSQTT
ISRFEALNLSFKNMCKLKPLLEKWLNDAETMAIDNMLPSPSSLSSPMMGFEGMTGRRRKK
RTSIETNVRVALERNFISNQKPNSEEILLMGKQLNMEKEVIRVWFCNRRQKEKRINPCSA
TPPLPSQSSLVTHKPPCYNPHMMSSQGLHQAATSLSTTVTSPSPSATCPLTPCPLTPSGS
ATMSSAPSSVTPPPHSTASNAPPTLSAHSLNAGNTMMGVSTGMNQALISSNPLATMQALA
ASGGQLPISSLEAGGQMILGGAGVRPSLFLNRHTLLPMASHQACVGLVGGPRGDSPPPRA
SGMDVNSCSASPCSSPASFCSFSEASPPPLGGAMAE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttcgtctttcagagaactgcttccgacttcagcgcc
tggcgtctcaagtccccgctggctctacgctccagctccgatatcaggatgtcaaaacca
gcagaggatgagaagcctgggacagactttccaggggagagcacagactccgagaggaac
agtcccgatgcaaatgatcaggttcagccaatgaaaacgagtcccttcagtctttctcct
tccttgagcaacaccaagagtaaaagtgaagctggccctgagatgacctccacccatgtg
ccgcctccctcccagcagcagacacctcaccctcacacacaactcatgttggcagggagt
cagctggcagggctggctgccctcttgcctgcgcagcagcagctgttgcttcagcaggcc
caggctcaactcctggccgctgccgtgcagcagtccaacgcggctcacgctgctcatgcc
gcccacgcagcagcccaagccaatcagcagcagcagcaacaacagcagcagcagcagctg
accaaacaagagcatgcccagcctcagctcacgctctctcagcctatccagctcaccgcc
caggatatccagcaactgttgcagctgcagcagttagtcctgatgcccggccatcacctg
cagtctcctcagttcctcctgcctcaggcccagggacaacaggggcagcagggtaagtgg
gacctactaagtttactctcgacaccaaatttaatttcgctacctcagcatcagcaaagc
caggggagtcttctaactacgccacccaggctgggactgcaagcacagcgtcgtcacggt
gacggcctcacgtcgttacagagggacaagagcggggacggcggcgtgacctccggggcc
tcggccgcccccatgacctcggtgacctctggcccgcacggtgaggagccaagtgacctg
gaggagctggagcagttcgcccgcaccttcaaacagagacgcatcaaattgggcttcaca
cagggtgacgttggcatggcaatggggaaactgtatgggaatgacttcagccagaccacc
atctctcgcttcgaggccctcaacctgagctttaagaacatgtgcaagctcaagcctctg
cttgagaagtggctaaacgatgcagagaccatggcgatagacaacatgcttcccagcccc
agctctctctcctcccccatgatggggtttgagggcatgacggggcgccgcaggaagaaa
cgcaccagcattgagaccaacgtccgcgtggccttagagcgcaacttcatctcgaaccag
aagcctaactcagaggagatcctcctgatgggaaagcagctcaacatggagaaggaggtg
atccgggtctggttctgcaaccggcgccagaaagagaaacgcatcaacccctgcagtgcc
acccctcccctgcccagccagtcctcccttgtgacgcacaaacccccctgctacaaccca
cacatgatgtctagtcaggggctgcaccaggctgccaccagcctcagcacaaccgtgacc
agcccatcgccctcggcaacctgccctctgaccccctgccctctgacccccagtggctct
gcaactatgagctccgccccctcctctgtgactccgcctccacacagcacagccagcaac
gcccctcccaccctcagtgcccacagcctgaacgctgggaacacaatgatgggagtaagc
acagggatgaaccaggctctcatcagcagcaatcccctggccacaatgcaagctctggct
gccagtggtgggcagctgcccatttccagtcttgaggccggaggtcagatgatcctgggc
ggggctggggttcgcccctccctattcctcaaccgccacaccctcctgcctatggcgtcc
caccaagcctgtgtgggattggtcggcggtcccaggggcgactctccgcccccccgcgcc
agcggcatggacgtcaactcctgctccgcctctccctgctccagccctgcctccttctgc
tcgttcagcgaagcctcaccgccgccgcttggtggggccatggccgagtga
DBGET
integrated database retrieval system
