Oncorhynchus mykiss (rainbow trout): 110488518
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Entry
110488518 CDS
T07259
Symbol
snx27a
Name
(RefSeq) sorting nexin-27a
KO
K17936
sorting nexin-27
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110488518 (snx27a)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110488518 (snx27a)
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110488518 (snx27a)
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110488518 (snx27a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
PDZ_6
RA
SNX17-27-31_F1_FERM
RA_2
PDZ_2
SNX17_FERM_C
USP7_C2
DarA_N
SNX17-31_F2_FERM
Motif
Other DBs
NCBI-GeneID:
110488518
NCBI-ProteinID:
XP_036826502
Ensembl:
ENSOMYG00000003896
UniProt:
A0A8C7NPP1
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All DBs
Position
32:complement(39451446..39494663)
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AA seq
564 aa
AA seq
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MADVEGDEINSALPSASRNGPAAGSVVGTGVQNATQVTSGPRMVRIVKSESGYGFNVRGQ
VSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNGVSVEGATHKQVVDL
IRAGERELVLSVLSVPPQEADGLEAGDESAAQLSYDYSDKQAVPISIPTFKHVEQHAERF
VVYNVYMSGRQLCSKRYREFAILNQNLKREFASYTFPKIPGKWPFSLSEQQLDTRRRGLE
EYLERVCSVRVIGESDIMQEFLSESDENYNGVSDVELRIALPDKTIISVRVRKNSTTDQV
YQALVMKVGMDSIMASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTCLALRKW
LFTSQEEELLRDNPLAVHYCFHQALDDVKKGFIKTEDNSYQLTKLAEQRKMAMYLSLLRS
CEGYNEVMFPHCACDSRRKGHVITAISMHHFKLHACTEDGTLENQVIAFEWVEMQRWDTD
EEGMAFCFEYARGEKKPRWVKIFTPYFNYMHECFERVFCELKWRKRVEEEASDKDNQNCS
NNEYLPALETQKGWRHLGGEIATS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgttgaaggcgatgaaattaattcggctctcccttcggcttcccgtaatgga
cccgctgcaggttcggtagtcggtaccggagtccaaaatgctacccaagtgacgtcaggt
ccacgaatggttagaattgtaaagtcggaatcaggatatggattcaacgttcgtggacaa
gttagcgaaggaggacaactgcgaagcatcaatggggaattgtatgcacctcttcagcat
gtcagtgctgttttgcctggaggggcagcggaccgagctggcatatcaaagggtgacagg
attctggaggttaatggtgtgagcgtggagggggccacccacaagcaggtggtggatctg
atccgggccggggagagggaactggtgctttctgtgctgtctgtgccgccccaggaggca
gacggtcttgaggccggggatgagagcgccgcccagctcagctatgactacagcgacaag
caggccgtgcccatctccatccccacattcaagcacgtggagcagcacgccgagaggttt
gtggtgtacaacgtgtacatgtcgggcaggcagctgtgctccaagcgctaccgggagttt
gctatcctgaaccagaacctgaagagggagtttgccagttacacctttcccaagatccca
gggaagtggcccttctccctgtctgagcagcagctggacacacgccgcaggggcctggag
gagtacctggagagagtttgttcagtacgggtgattggtgagagtgacatcatgcaggaa
ttcctttctgaatcagatgagaattacaatggcgtttcagacgtggagctgcggatagcc
ctgccagacaagaccatcatctctgtcagggtgcgcaagaacagcacaactgaccaagtc
taccaggctttagtgatgaaggttggtatggacagcatcatggccagctactttgccctc
tttgaagtcatcaaccactcctttgtgcgaaaactggcccccaacgagtttccccacaag
ctgtacgtgcagaactacacgtcagctgtgccgggcacctgtctggccctccgcaagtgg
cttttcacttctcaggaggaggaacttctcagggacaacccgctggccgtccactactgc
ttccatcaggcattggatgacgtgaagaagggattcatcaaaacagaagacaattcttac
cagctgacgaaactggcagagcagcgcaagatggccatgtacctgagtctgctgcgctcc
tgtgagggctacaacgaggtcatgttcccccactgcgcctgtgactcccggaggaagggc
cacgtcatcacggccatcagcatgcaccacttcaaactgcacgcctgcacagaggacggc
acgcttgagaaccaggtgatagcgtttgagtgggtggagatgcagcgctgggacactgac
gaggagggcatggcgttctgctttgagtacgccaggggagagaagaaacctcgctgggtc
aagatcttcacaccatacttcaactacatgcacgagtgcttcgagagggtcttctgtgag
ctcaagtggaggaaacgggttgaagaggaggcctctgacaaagacaaccagaactgcagt
aacaacgaatatctccctgctctggagacacagaagggatggcgccatctagggggcgag
atcgccacatcctaa
DBGET
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