KEGG   Oncorhynchus mykiss (rainbow trout): 110488617
Entry
110488617         CDS       T07259                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22 isoform X1
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110488617
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:omy03041]
    110488617
Spliceosome [BR:omy03041]
 Complex B
  Other components
   Prp19-related factors
    110488617
 Complex C
    110488617
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 zf_CCCH_4 Torus RRM_occluded zf-CCCH_2 Nup35_RRM_2 zf-CCCH zf-CCCH_4 zf-CCCH_10 RRM_YTH1 zf-CCCH_12 RRM_3 zf-CCCH_PARP12
Other DBs
NCBI-GeneID: 110488617
NCBI-ProteinID: XP_021416572
Ensembl: ENSOMYG00000008298
UniProt: A0A8C7VEF0
LinkDB
Position
14:complement(6175205..6196177)
AA seq 421 aa
MATSLGANTYNRQNWEDADFPILCQTCLGENPYIRMSKEKYGKECKICARPFTVFRWCPG
TRMRFKKTEVCQTCSKMKNVCQTCLLDLEYGLPIQVRDTGLDIKDDVPKSDVNKEYYTQN
AEREIGNSDGTRPVGLLGKAPSSSEMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECP
YRHEKPTDPDDPLADQNIKDRYYGINDPVADKLLKRASTMPRLDTPEDKTITTLYVGGMG
DTISDAELRNHFYQFGEIRTTTIVQRQQCAFIQFATRQAAELAAEKSFNKLIINGRRLTV
KWGRSQAARGKEAYQDGVSEMGTRLDPVPGLPGALPPPPALEEDVPTNYFNLDPGTSPNV
MNISLPPPPGINPPPPGFGAPMFHMGSMGPPPPMGMRPPGHIHYPSQDPQRMGAHAARHG
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggcgacgtccctaggagctaacacatacaacagacagaattgggaagacgcggatttc
ccaattctgtgtcagacatgtttgggggaaaatccatacatccgcatgagcaaagagaag
tatggaaaagaatgcaagatctgtgctcgtcccttcactgtgttccgctggtgtccagga
acaaggatgcgcttcaagaagacagaggtgtgtcagacctgcagcaagatgaagaacgtc
tgtcagacctgtctgcttgacctggagtatggtttgccaatccaggtcagggacaccggg
ctggacatcaaggatgatgtgccgaagtcagacgtgaacaaggagtactacacacagaat
gctgagagagagatagggaactctgatgggacacggccagtgggtctgctgggtaaggcc
cccagctccagtgagatgctgctgaagctggcccgcactacgccctactacaagaggaac
agaccccacatctgctccttctgggtgaagggagagtgcaagagaggagaagagtgtcct
tataggcacgagaagcccacagacccagatgatcccctggcagaccagaacattaaggac
cgttactatggtattaatgacccagtggctgacaagctgctgaaacgggcctccaccatg
cccagactggacacgcctgaggacaagaccatcaccacactctatgtaggggggatggga
gataccatctcagatgcagagctgaggaatcacttctatcagtttggggagatccggacc
accaccattgtccagaggcagcagtgtgccttcatccagtttgccacacggcaggcagct
gagcttgctgcagagaagtccttcaacaagctcatcatcaacggacgcaggctcaccgtc
aagtggggcaggtctcaggcagccagaggaaaggaggcctaccaggatggggtcagtgag
atgggaaccagattagaccctgtgccaggactgcctggagctctccccccaccccctgct
ctggaagaagacgttcccactaactacttcaatctggaccctggaacatctcctaatgtc
atgaacatctctctgcccccgccgcccggcatcaacccaccacctccaggttttggtgcg
cctatgttccacatgggttcaatgggtccccctcctcccatgggcatgagacccccagga
cacatccactacccttcccaggacccccagcgcatgggtgcccacgctgcccgccatggc
gactag

DBGET integrated database retrieval system