Oncorhynchus mykiss (rainbow trout): 110488636
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Entry
110488636 CDS
T07259
Symbol
rnf20
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1A isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110488636 (rnf20)
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110488636 (rnf20)
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
110488636 (rnf20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
BRE1
zf-RING_2
HAT1_C
zf-rbx1
SOGA
Motif
Other DBs
NCBI-GeneID:
110488636
NCBI-ProteinID:
XP_036798647
Ensembl:
ENSOMYG00000009773
UniProt:
A0A8C7VET2
LinkDB
All DBs
Position
14:6644806..6660926
Genome browser
AA seq
1050 aa
AA seq
DB search
MSGQKRMCDSNIPSSSSSAPPEKRREREGGEDGGPGVSATAGGSTAVETVIKLGGVSNSE
EQDVKALQVKNRKLGESLDQRQVIEDELRERIERLETRQATDDASLLILNRYWNQFDDNV
CLIGRRYDESGSESVETPAGEGRSLKPDTPEPDGDSNQERAKDRGHQGETTTSFLATLAS
SSSEEMEAELQERVESSQKQANRVVEIYDSLKTTVEQLKKDQDSGAEGSMWQVAAQLNTL
LSSENDRLRQLTEDLQQKHSHMTSESRSLGRAVARADTRVSELQGLIEELQWDMEKIRRR
ENRLNTHLGEILERVNSKGYKVCGEASSVCGTITINKRKFEEMNSELEENRELAENRLSE
LQRRQQDLQTFNQENNNMKVSLQSLTLGLGRQNPMALSPNPAIGLAEVPRPYSAIQTSQM
KVELLSRAEGVVRESSEYRCLQSQFSVLYNESVGLKSQLDETRTRLNTTRTARLRQLEHM
ENDEVSLQRKVRTEVFQLEDTLAQVRKEYEMLRIEFEQTLAANEQAGPINREMRHLISTL
QTHNQHMKGEVVKYKLTLREAQTDLSQARTTKGSAILQSQSSTELDLKEETTSPLMPAAS
ADVTIKMESDNGSATPTSTSTSVKTEPGTETEGEIKEEEKEKEVKKEKEKERERERERPT
RGGGGTEEKEKAGTSNQLEEVVPERTFVIGGPKRKEVEQLKIVRAELKKAQESQREMKLL
LDMYRSAPKEQRDKVQLMAAEKKAKSEAEELKQRLRDLEERERREGKKMADEEALRKICS
VEEQINILNKKLSLAKQEEDALLSEMDVTGQAFEDMQEQNIRLMQQLREKDDANFKLMSE
RIKSNQIHKLLKEEKEELADQLLTLKTQVDAQLQVVRKLEEKERLLQGTIGTAERELALR
TQALDMNKRKTQESTVLSEEVRSQLDQVQQRLGTVREEVIENSISKEKQSFNARRAQEDI
SKLRRKIEKAKKPAETVRNGDDILNEEINDYKARLTCPCCNSRVKDAVLTKCFHVFCFEC
VKTRYDTRQRKCPKCNAAFGANDFHRIYIE
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggacagaagcgtatgtgtgactccaacatcccctcttcatcctccagtgcgccc
cccgagaaacggagggagcgagagggaggagaggatgggggtccaggggtcagcgctact
gcaggagggagcactgctgtggaaacagtcatcaaactcgggggggtttccaactcggaa
gaacaggatgtcaaagctctccaggtgaagaacaggaagttgggagaatccctcgatcag
agacaggtgattgaggatgagctgagagagagaatcgagagactggagactcgtcaagct
actgatgacgcaagcctactgatcctgaacagatactggaatcagtttgatgacaatgtg
tgcctgattggaaggcgctacgatgagtcagggagcgagtctgtggaaaccccggctgga
gaggggcggagcctcaagcctgacaccccagaacccgacggcgactccaaccaggagaga
gccaaagaccgaggccaccagggggagacgaccacatctttcctggcgacgctggccagc
agcagcagtgaggagatggaggcagagctgcaagagagggtggagtccagccagaagcag
gccaaccgcgtggtggagatctacgacagcctgaagaccaccgtggagcagctaaagaag
gaccaggactctggagcagagggttccatgtggcaggtcgctgcccagctcaacaccctc
ctgtccagtgagaatgaccggctgcgtcagctgactgaggaccttcagcagaagcacagt
cacatgactagcgagtctcgttctctgggcagggcagtggcgagggcagacacgcgggtc
agtgagctgcagggcctcatcgaggagctccagtgggacatggagaagatccgacgcaga
gagaaccgcctcaacacacacctgggagaaatcctggagagggtaaacagtaaaggctac
aaggtgtgtggggaggccagcagtgtgtgtggaaccattaccatcaacaagagaaagttt
gaggagatgaatagtgagttggaggagaacagggagctggcggagaaccgtctgagtgag
ctgcagcggcggcagcaggacctgcagacgtttaaccaggagaacaacaacatgaaggtg
agcctgcagagcctgaccctgggcctgggccgccagaatcctatggctctctcccccaac
ccagccattggattagctgaggtcccacgtccttattcagccatccaaaccagtcaaatg
aaggtggagttgttgagtcgtgctgagggggtggtcagggagagctcagagtaccgctgt
ctccagtcccagttctctgtcctctacaacgagtctgtgggcctcaagtctcagctggac
gagacgcgcacacgcctcaacaccaccaggacggcacgcctccgacagctagaacacatg
gagaatgatgaggtgtctctccagaggaaggtgcgtactgaggtgttccagctagaggac
actctggcccaggtcaggaaggagtatgagatgctccggatcgaatttgaacagaccctc
gctgccaacgaacaagcaggtcctatcaacagggagatgcgtcacctgatcagcaccctg
cagacacacaaccagcatatgaagggagaggttgtgaaatacaaactgacactcagagag
gcacagactgacctcagccaggctcgtactacgaagggcagtgctatccttcaatcacaa
tccagtacggagctggacctgaaggaagagaccacctcccccctgatgcccgctgcctct
gctgatgtcaccatcaagatggagtctgacaatggttcagccacacccaccagcactagt
acctcagtgaagacggagcctgggacagaaacagagggagaaatcaaagaggaggagaaa
gaaaaagaggtgaagaaagagaaggaaaaggaacgagagagggagagagagaggccaacc
cgtggagggggtgggaccgaggagaaggagaaggctgggaccagcaaccaattggaagag
gttgttccggagcgcacgtttgtgattggaggaccgaagaggaaggaggtggagcaactg
aaaattgtccgggcggagctaaagaaagcccaggagtctcagagggagatgaagctactg
ctggatatgtaccgctccgcgcccaaagagcagagggacaaagtccagctcatggccgct
gagaagaaggctaagtcagaggcagaggagctgaagcagcgtctaagggatctggaggag
agggagaggagggaggggaagaagatggctgatgaggaggcactccggaagatctgctct
gtcgaggaacaaatcaacatcctcaacaagaagctctccctggccaagcaggaggaggat
gcgttgctgagtgagatggacgtgacgggccaggcctttgaggacatgcaggagcagaac
atccggctgatgcagcagctcagggagaaggacgacgccaacttcaagctgatgtcggaa
cgcatcaagtccaaccagatccacaagctgctcaaggaagagaaggaggagctcgccgac
cagctgctcacgctcaaaacgcaggtggatgcccagctgcaggtggtgaggaagctggag
gagaaggagcgcctcctccagggcaccatcggtactgcagagagagagctggctctgagg
acacaagctctggacatgaacaaacgcaagacccaggagtcaacggtgctgtcggaggag
gtgcgtagtcagctggaccaggtgcagcagagactgggcaccgtcagggaggaggtcatt
gagaacagcatctccaaagagaagcagtccttcaatgcacgccgcgcacaggaggacatc
tccaaactgcggaggaagatcgagaaggccaagaaacccgcagagaccgtccgcaacggc
gatgacatcctcaatgaggaaatcaacgattacaaggctcgtctgacctgcccgtgctgt
aactcccgggtaaaggacgccgtcctgaccaagtgtttccacgtcttctgcttcgagtgc
gtcaagacacgctacgacacgcgccagaggaagtgccccaagtgcaacgccgcctttggc
gccaacgacttccaccgcatctacatcgaatag
DBGET
integrated database retrieval system
