Oncorhynchus mykiss (rainbow trout): 110488721 Help Entry 110488721         CDS       T07259                                  Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03040   Spliceosome omy04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     110488721   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     110488721  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:omy03041]     110488721    04121 Ubiquitin system [BR:omy04121]     110488721    03400 DNA repair and recombination proteins [BR:omy03400]     110488721 Enzymes [BR:omy01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      110488721 Spliceosome [BR:omy03041]  Complex B   Other components    Prp19 complex     110488721  Complex C    Prp19-CDC5 complex     110488721 Ubiquitin system [BR:omy04121]  Ubiquitin ligases (E3)   U-box type E3    110488721 DNA repair and recombination proteins [BR:omy03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     110488721 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_HPS5 PEP5_VPS11_N Beta-prop_SPT8 U-box Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_Nup120_160 PROPPIN Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 eIF2A B-prop_COPA_B_2nd RMC1_N Cytochrom_D1 Beta-prop_LRRK2 Nucleoporin_N Mala_s_1-like zf-Nse Cep57_MT_bd ATG16 Motif Other DBs NCBI-GeneID:  110488721 NCBI-ProteinID:  XP_021416719 Ensembl:  ENSOMYG00000005283 UniProt:  A0A8C7NPC1 LinkDB All DBs Position 14:complement(8642562..8647469) Genome browser AA seq 505 aa AA seqDB search MSLVCAISNEVPEHPCVSPVSNQVFERRLIEKYIAENGVDPMNSQPLSEEQLIDIKVSHP IRPKAPSSTSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVAPQSMPASQPAAGGAGGEPMEVSVQVGMTPEIIQKLQDK ATVLTTERKKRGKTVPEELVRAEDLSKYRQVASHAGLHSASVPGILCMDLCPSDTNKVLT GGADKNVVVFDKKEEQIIATLKGHTKKVTSVIYHPSQSVVFSASPDSTIRVWSVTGGNCI QVVRAHEASVTGLSLHATGDYLLSSSEDQYWAFSDIQTGQVLTKVTDEAAGVALTCAQFH PDGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSVKLW DLRKLKNFKTIALDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFSDHSGLVT GLAFGDNAQFLSSAGMDRSLKFYSL NT seq 1518 nt NT seq  +upstreamnt  +downstreamnt atgtctttggtttgcgcaatttccaatgaggtccccgagcacccttgcgtgtccccggtg tctaaccaggtgttcgagcgccgactgatcgagaagtatatcgcagagaatggagtggat cccatgaatagccaaccactgtcggaggagcaacttatcgatataaaagtgtctcatcct atccgaccaaaggctccctcttctaccagtatccctgccatactcaaggctctgcaagat gagtgggatgcggtcatgttgcacagcttcactctgaggcagcagctgcagacgactcgc caggagctctctcacgccctctaccagcatgatgcagcctgcagagtcattgctcgtctt accaaggaggtcactgcagccagagaggccctggccacactcaagccccaagccggattg gtggcccctcagtctatgcccgcctctcagccagccgctgggggtgctggtggggaacca atggaggttagtgtgcaggtgggaatgactccagagatcatccagaagcttcaagataag gctactgtccttaccacagagcgaaagaagagaggaaagaccgtgccagaggagctggtc agggctgaggatctgagcaagtaccgccaagtggcttcccacgctggacttcacagtgcc agtgtcccaggaatcctgtgtatggacctctgtccttcagacaccaacaaagtactcact ggtggggctgataagaatgtggtggtatttgataagaaggaggagcagatcattgccacc ctcaagggtcacaccaagaaggtcacctctgtcatctaccacccctcccagtctgtggtg ttctctgcctctccagacagcaccatccgggtgtggtctgtgactgggggcaactgtatc caggtggtgcgagctcacgaggcgagtgtgaccgggctgtcacttcacgcaaccggggac taccttctcagctcttccgaagaccagtactgggccttctcggatatccaaactggccaa gtccttaccaaagtcacagatgaggctgctggtgttgctctgacttgtgctcagttccac cccgacggtctgatcttcgggacgggaaccgccgactcccagatcaagatctgggatctg aaggagcgcacaaacgtggccaacttccccggccactctggccctgtcacctccatcgcc ttctctgagaacggatactacctggctacaggtgcccaggacagctctgtgaagctgtgg gatctgaggaaactgaagaacttcaagaccatcgccctggacaacaactatgaggttaag tctctggtgtttgatcagagtggtacgtacttggctgtgggtggatccgacatcagggtg tacatctgcaagcagtggtcagaggtcctcaacttcagcgaccattctggcctggtgaca gggctggcattcggagacaatgctcaattcctttcctccgctggaatggacagaagcctc aagttctacagcctgtag

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