Oncorhynchus mykiss (rainbow trout): 110488817
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Entry
110488817 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110488817
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110488817
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110488817
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
Motif
Other DBs
NCBI-GeneID:
110488817
NCBI-ProteinID:
XP_021416898
Ensembl:
ENSOMYG00000033370
UniProt:
A0A8C7T0P1
LinkDB
All DBs
Position
14:complement(12820904..12828721)
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AA seq
626 aa
AA seq
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MDPPRTRSRSGFFHYGMNGGGNGNNTINNGNMMNASGGIGVNYPQQNNPGWVPHGARGSY
SENQHTQGNYLTGGAQRHPSHGAHRHPGTGVLHFHPDNICSDERDKMEDSPSPKRQRLSQ
QSMLDLSSAPPSTPSSPIRPWELPHTPTTWATPPPSRRPHPHYLPERCHTPVRNRRSPPM
RRQRGRRDRLTSHPHHNSHPQQQQQHHHHHYHHHHHNPHHHHSHPHHGLSAGPQDENYRH
PVPPQSYPYNQQPPRGPEERPYHPPNLSPRPLHHPPNLSPRLMHPAAHPQHPPQQQSSVV
LDLHDQGSSQVSYPVSPPGAPPGLSPRSAPPQLPACSVVFSGQHYPVCSVPPSVLQTCSV
QHLPMPYPFPSLLSSDPTFLLPPPHLPHHPPHLPHHPPHLPQPGQFGPYPTQQARSPLQR
IENDVELLGEHLSLGAGLHYPPAAHPGLPPHSTQLHFLSHDPLPQEFFGVSYPSFMPRRI
PGRRYRSQQPLPPSPYHPSFLPYFLSMLPVQPTGPAISLELDVDDGEVENYEALLNLAER
LGEAKLRGLTKGDIEQLPSYRFNPNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKC
VDKWLRANRTCPICRADASEVQRDSE
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggatccgccgaggactcggtcacgttcaggtttctttcattatggcatgaacggtggt
ggcaacggcaataacacaatcaacaatgggaacatgatgaatgccagcggagggatcggg
gtgaattaccctcaacagaacaaccccggctgggttccgcacggagcgcgcggtagctat
tcggagaaccagcacacccaggggaactacctgaccggtggggcgcaacgccacccttcc
cacggagcacacagacaccccggcaccggtgtcctgcacttccaccctgataacatctgc
agtgatgagcgggacaagatggaggacagtcctagcccaaagcgacagcgtctttcccag
cagtctatgttagatctgagctctgcccctccctccaccccatcctctcccattcgtccc
tgggagctaccccacacccccactacctgggccacacccccacccagtcgcaggccacac
ccccactacctgccagagcgatgccacactcctgttcgcaaccgccgcagtcctccaatg
agacgccagcgtggccgccgtgaccgtctcacctcccaccctcatcacaactctcacccc
caacaacaacaacaacatcatcatcaccactaccaccaccatcaccacaacccgcaccat
catcattctcacccccaccacggcctctcagcagggcctcaggatgagaactaccgccac
cccgtcccccctcagagttacccctacaaccagcaacccccccgggggccagaggagcgc
ccctaccacccccccaacctatccccacgccccctccaccaccctcctaacctgtccccc
aggctgatgcaccctgccgcccacccccagcacccccctcagcagcagagcagtgtggtg
ctggaccttcatgaccagggttcttctcaggtgtcgtacccggtctctccccctggtgca
ccccctggcctgtctccccgctctgcccccccgcagctcccagcatgctcggtggtcttc
agtggacaacactaccctgtctgcagtgttcctccatcggttctgcagacatgctctgtg
cagcacctgcccatgccctacccattcccctccctgctgtccagtgaccccacctttctc
ctgccccctccccacctcccccaccatccccctcacctcccccaccatccccctcacctc
ccccagcctggacagtttggaccctaccccacacagcaggccagatcgccgttacagagg
atagagaatgacgtggagctgttgggggaacacttgtccttaggggcgggtctccactac
ccccccgcagcccaccccggcctgcccccccactccacacagctccacttcctttcccat
gatccactgccacaggagttctttggtgtgtcgtatcccagcttcatgccacgacgtatc
ccaggacgacgctaccgctcccagcagccactgccaccctcgccttaccaccccagtttc
ctgccttacttcctctccatgctgccagtccagccaacaggccctgccatcagcctggag
ctggacgtagatgacggagaggtggagaactatgaggcccttctcaacctggctgagcgt
cttggagaggccaaactcagaggactgaccaagggagacattgaacagctgccttcctat
aggttcaaccccaacaaccaccaatcagaacagacgctgtgtgtggtgtgtatgagtgac
tttgagtctcgtcagctgctgcgggttctaccctgcagtcatgagttccatggaaagtgt
gtggacaagtggctcagggctaacaggacgtgtcccatctgtagggctgatgcctccgag
gtccagcgagactcagagtga
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