Oncorhynchus mykiss (rainbow trout): 110488875
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Entry
110488875 CDS
T07259
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03013
Nucleocytoplasmic transport
omy03015
mRNA surveillance pathway
omy03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110488875
09122 Translation
03013 Nucleocytoplasmic transport
110488875
03015 mRNA surveillance pathway
110488875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110488875
03041 Spliceosome [BR:
omy03041
]
110488875
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
110488875
Spliceosome [BR:
omy03041
]
Common components
Common spliceosomal components
Cap binding complex
110488875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AAA_11
Dynein_AAA_lid
AAA_13
Vfa1
WIT1_2_N
FapA
GBP_C
EMC3_TMCO1
DUF1281_C
RRF
Exonuc_VII_L
tRNA_bind_2
Motif
Other DBs
NCBI-GeneID:
110488875
NCBI-ProteinID:
XP_021416987
Ensembl:
ENSOMYG00000044054
LinkDB
All DBs
Position
14:complement(14206617..14221615)
Genome browser
AA seq
796 aa
AA seq
DB search
MSRRRHSDGDDGGQSHKRRRTSEPVEIEDRLESLICRVGEKSTSSLESNLEGLAGVLEAD
LPNYKNKILRILCAVARLLPEKLTVYTTLVGLLNARNYNFGGEFVEAMIRQLKETLKANL
YTEALYLVRFLCDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRSDWFVYAVLSSLPWV
GKELDEKKDVEMDRLLNQIDGYLKRRLKTHVPMLQVWTAEKPHPQEEYLDCLYAQIQKLK
KDRWQERHILRPYIAFDSVLCEALQHNLPPFTPPAHMPDCQYPMPRVIFRMFDYTDAPEG
PVMPGSHSVERFVIEDNLHNIIKSHWKERKSCAAQLLSYPGKNKIPLNYHIVEVIFGELF
QLPCPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMMYVRLDTMNTICIDRLLNWFSHH
LSNFQFRWSWDDWVDCLALDADKPKPKFVKEVLEKCMRLSYHQRIVDIVPPTFSGLIPAD
PIFFYKYQDEANSALPGYAVAIAVGNAIKNRASNEEILTVLKDVPNPNQEDDDDEGEGFN
PLKIEVFLQTLLHLAAKSFSHSFSALAKFHEILKALTDCDEGKLHILRVVYEVWKNHPQM
VSVLVDKLIRTQIVDCAAVANWLFSPSMAHEFTRFYVWEILHSTIRKMNKHVQKIQKELE
EAKDKLERQQHKKQKDSGDEEDMEKNSEDEDGQLEEQIERLQEKVESAQSEQKNLFLVIF
QRFIMMLTEHLVRCETGSVDFSTPWYKNCIERLQQIFLMHHVTIQQYMGTLENLLFTAEL
DHHILAVYQQFCALQL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaagacggcacagtgacggagatgatggtggccagtctcacaaaagaaggaga
acatctgagcccgttgagattgaggatcgcctggaatcactgatatgtcgggtgggagaa
aagagtacctcttccctggaaagcaacttggaaggtctcgcaggtgtattggaagcggac
ctccccaattacaaaaacaaaatcctgcgcatcttgtgtgctgtggctcgacttctaccc
gagaagctgaccgtctacacaacactagtgggccttctcaatgccaggaactacaacttt
ggcggggagtttgtggaggccatgatcagacaacttaaagagaccttgaaggccaacctc
tacaccgaagctctttacctggtgcgcttcctctgtgacctggtgaactgccacgtgatc
gctgccccctccatggtggccatgtttgagaactttgttagcgtcactcaggaggaggat
gttccgcaggtgcgttcggactggtttgtctatgctgtactctccagtctcccctgggtt
gggaaggagcttgatgagaagaaggacgtggagatggaccgactcctcaaccagattgac
ggttatctcaagaggcgactgaagactcatgtccccatgcttcaggtttggacggcagag
aagccacacccacaagaagagtacctggactgcctgtacgctcagatccagaagctaaag
aaggaccgctggcaggagcgccacatcctgcggccgtacattgcctttgacagcgtgctg
tgcgaggccctgcagcacaacctgccacctttcaccccaccagcccacatgcctgactgc
cagtaccccatgccccgcgttatctttcgcatgttcgactacaccgatgcccccgagggc
cctgtcatgccaggcagccactctgtggagaggtttgttattgaggataaccttcacaac
atcatcaagtcccactggaaagagaggaagagctgtgctgcgcagttgctgagctatcca
gggaaaaacaagatcccactcaactatcacattgtggaggtgatctttggagagctcttc
cagctgccctgtcccccccacatcgacgtcatgtacaccacgctgctcattgagctctgc
aagctgcagccaggctccctgccacaagttttggcccaagccacagagatgatgtacgtg
aggttggacaccatgaacactatttgcatagaccgactcctcaactggttctcccaccat
ttgagcaactttcagttccgatggagctgggacgactgggtggactgtttggccctggat
gcagacaagcccaagcccaagtttgtcaaggaggttctggagaaatgcatgaggctctcc
tatcatcagcggatagtggacatcgtccctcccactttctcaggactcatcccagccgac
cccatcttcttttacaaataccaagatgaggccaacagtgcgctgccaggctatgcggtg
gccatagcggtgggcaacgccatcaagaaccgggcctccaacgaggagatactcaccgtg
ctcaaagacgtgccgaaccccaaccaggaagatgacgacgatgagggcgagggcttcaac
cccctgaagatagaggtgttcctgcagaccctcctccatctggctgccaagtccttcagt
cactccttcagtgccctggccaagttccatgagatcctgaaagccctgacggactgtgac
gagggcaagctgcatatcctccgggtggtctacgaggtctggaagaaccacccacagatg
gtctctgtgctggtggacaagttgatccgtacacagattgtggattgtgcagccgtagcc
aactggctcttctcccctagcatggctcatgagtttaccaggttttacgtgtgggagatt
ctgcactccaccatccgtaagatgaacaaacacgtccagaagattcagaaagagctggaa
gaggccaaggataagctggagaggcaacagcataaaaagcagaaggacagtggagacgag
gaagacatggagaagaacagtgaggatgaggacggtcagctggaggagcagatagagcgt
ctgcaggaaaaggtggagtcggcccagagtgagcagaagaaccttttcctggtcatcttc
cagcgcttcatcatgatgctgacggagcacctggtgcgctgcgagacaggcagtgtggac
ttcagcacgccctggtacaagaattgcattgagaggctgcagcaaatcttcctcatgcac
catgtgacaatccagcagtacatggggacactggagaacctgctgttcaccgccgagctc
gaccatcacattctagctgtgtaccagcagttctgtgccctgcagctctga
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