Oncorhynchus mykiss (rainbow trout): 110489032 Help Entry 110489032         CDS       T07259                                  Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:omy00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     110489032  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:omy01009]     110489032   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:omy04515]     110489032 Protein phosphatases and associated proteins [BR:omy01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      110489032 Cell adhesion molecules [BR:omy04515]  Cadherins   Protocadherins    110489032 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_CELSR2_9th Cadherin_2 Cadherin_4 SGBP_BT4661-like PDGLE Syndecan Fibulin_C NnrU Motif Other DBs NCBI-GeneID:  110489032 NCBI-ProteinID:  XP_021417255 Ensembl:  ENSOMYG00000036711 LinkDB All DBs Position 14:complement(25597371..25979494) Genome browser AA seq 1256 aa AA seqDB search MADTLMSRAEGILRVVSSSSFIRCVLLRMLRSAQSCLIESPMRFQSSGVMVLRWDATLVL AAMLLVCCAADPTDILYRMLEEQPPNTLIGSLASDEGLPDSGHLYKLEVGTPYLRVDGKT GDIYTTEVPIDRETLRDCRNLLEGDKCFLEFEVSITDLKQGQGPRLIEGRIEVQDVNDNT PQFTSPILMLSIPENTHIGALFSIPMASDKDSGHNGVAEYSLSAGPDADQLFSLQVAEDT DEKQPQLIVMGNLDREQKDSYDLNIRVVDGGTPPRASSALLRVTVTDQNDNAPKFERSHY EAELAENSPVGHSVLQVKANDADMGTNGEIDYSLHQASDAVQRLLRIDRSTGIIYVKGLV DREEESFLKFFVVAKDRGPNSKSSKVLVTINVKDQNDNAPAIEIRGIGLVTHHDGVANIS EDMPIGTAVALVQVSDRDEGENAVVTCVVAGDVPFQLRPASESANDRKRKYFLQTTTLLD YERIKDYRIEIVAVDSGNPALSSTNSLKVQVTDMNDNAPVFSPNLFEVDFAEENQPGDKV LDVVATDADSGSNAELTYSIIMDSTTKGLFEIDPKTGEVHVRNTLDREHREQYEFHVAAA DKGSPSLRGTATVVVKVLDRNDNDPKFMLSGYSFSVLENMPPLSPVGMVTVIDADKGENA MVRLSVEPDNGKFVIQNGTGTILSSISFDREKESTYTFRLRAVDAGDPPRSSYVGVTINV LDENDNSPYVTKPSNSSYKYLPPLTTPETRVEVVEAEDIDTGPNSELVFSITGGNPYGLF HISPNNGEITLAQEFTRKHNGLHRLVVKVSDKGKPPRHTTALVHIFVNETMGNITLIESL VGHSLYTPLDRDIAGDPNYALAQRSNILYGSLAGIAGVILVIVVVVVIRHRMQKDTKSGY QAGKKESKDLYAPKAGPKNGKGKKSKKGKVPKPTKPLEEDEEASLQKGLNFNLINDSVND SPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQAVQDLPATNTFVGTGD NNSTGSDQYSDYSYKANPPKYSNKQLPHRRVTFSTANQAQDLQDPSQHSYYDSGLEESET PSSKSSSGPRIGPLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGNCTHECTEFG HSDACWMPGQPSPNRKSSTKNAPKLSTFVPYLESEGQDHLLANGSPKPMADERGSAGGGS GGSKVANIRFLPPYSSAFSGGSDSGKGCEEIPLSQAAEYHSATTPTNQGSKREIYL NT seq 3771 nt NT seq  +upstreamnt  +downstreamnt atggcggatactttaatgtcacgcgcggaggggattctgcgggtcgtttcaagctcctcg tttattcggtgtgttttactgcgtatgttaagatcagcacaatcttgcctcattgaatca ccgatgcgtttccagtcaagcggagtgatggtgctgaggtgggatgccactctggtgttg gccgccatgcttctggtttgctgtgccgccgatcccactgacattctctaccggatgctc gaggagcagccgcccaacacgttgatcggcagcctggcatcggacgagggcctgcccgac tcaggccatctgtacaagctggaggtgggcaccccttacctgcgcgtggacggcaagacg ggagacatttacaccacagaggtccccatcgaccgtgagacactgcgggactgccgcaac ctgctcgagggcgacaagtgcttcctggagttcgaggtgtccatcacggacctgaagcag ggccagggaccgcgactgatcgagggccgcatcgaggtgcaggatgtcaatgacaacaca ccccagttcacctcgcccatcctcatgctgtccatcccagagaacacacacatcggggcg ctcttctccatccccatggccagcgacaaggactcgggccacaacggcgtggccgagtac tcgctcagcgccgggcctgacgccgaccagctcttcagcctgcaggtggccgaggacaca gacgagaagcagccgcagctcatcgtcatgggcaacctggaccgcgagcagaaagactcg tacgatctcaacatccgtgtggtggacgggggcacaccaccgcgagccagcagcgccctg ctgagggtgaccgtcaccgaccagaacgacaacgcacccaagtttgagaggagccactat gaggctgagctggctgagaacagccctgtgggacactcagtcttgcaggtgaaagccaac gacgctgacatgggtaccaacggggagatcgactatagcctgcaccaggcctccgatgcc gtccagaggttgctacgcattgaccgctccacagggatcatctacgtcaaggggctggtg gaccgagaggaggagagcttcctcaagttcttcgtggtggccaaggatcgcggccccaac tcgaagagctccaaagtcctggtgaccatcaacgtcaaggaccagaacgataatgcaccc gccatcgagatccgtggcatcggcctggtcacccaccacgatggtgtggccaacatctca gaggacatgcccatcggcacggctgtagccctggtgcaggtgtcggatcgtgatgaaggg gagaatgctgtggtcacctgtgtggtggccggggacgtccccttccagctgcggcccgcc agcgagtcagccaacgaccgcaagaggaaatacttcctgcagaccacgaccctgctagac tacgagcgcatcaaggactacaggattgaaatagtagcggtggactccggtaaccctgca ctgtccagcacaaactccctgaaggtgcaagtcaccgacatgaatgacaatgcccctgtc ttctcccccaatctgtttgaggtggactttgcagaggagaatcagccaggtgataaggtc ctggatgtggtggccacagacgcggacagtgggtccaacgcagagctgacctacagcatc atcatggactcaaccactaaggggctctttgagatcgaccccaaaacgggagaggtgcac gtgaggaatacgctggaccgtgagcacagggagcagtacgagttccacgtggcggcagcc gataagggctcgcctagcctgagggggacggccacggtggtggtcaaggtgctggatcgt aacgacaacgaccccaagttcatgttgagcggctacagcttctccgtcttggagaacatg cctccgctcagccctgttggcatggtgacggtcatcgacgcagataagggcgagaacgcc atggtgcgactctctgtggagcccgacaatggcaagtttgtcatccagaatggcacaggt actatcctctccagcatatcctttgaccgtgagaaggagagtacatacactttccgcctc agggctgtggacgccggtgaccctcccaggtcctcctacgtgggtgtgaccatcaacgtc ttggacgagaacgataactccccctacgtcaccaagccctctaactcctcctacaagtac ctcccacctctcacgacccccgagacacgcgttgaagtggtggaggccgaagacatcgac acgggacccaactccgagctggtcttcagcattaccggagggaacccctacggactgttt cacatctcgcccaacaatggggagatcaccctggcccaggagttcacccgcaagcacaac gggctccaccgtctggtggtgaaggtgagcgacaaaggcaagccaccacgccacaccacc gccctggtccacatcttcgtcaatgagaccatgggcaacatcaccctgatcgagtctctg gtgggtcacagcctctacactcctctggacagagacattgccggggaccccaactatgcg ctggcccagcgcagcaacatcctgtatggcagcctagcgggcatcgccggagtcatcctg gtcatcgtggtggtggtggtgatccgtcatcgcatgcagaaggacaccaagagcggctac caggcgggcaagaaggagagcaaggacctgtatgcccccaaagcagggcccaagaatggc aagggcaaaaagagcaagaagggcaaggtgcccaagcccaccaagccactggaggaggac gaagaggccagcctccagaagggcctcaatttcaacctcataaacgatagtgtcaatgac agtccccggatccacctgcccctcaactaccccccgggcagccccgacctgggcagacat taccgctccaactccccactgccctccatccagctgcagccccagtccccctctgcctcc aagaagcaccaagccgttcaggacctgcccgccaccaacacctttgtgggcacaggtgac aacaactctacaggctccgatcaatattcggattacagctacaaggcaaacccgccgaaa tacagcaacaaacagctcccccatcgccgagtgaccttctccacagccaatcaggctcaa gacctgcaggacccctcccagcacagctactacgacagcggattggaggaatcggagacc cccagctccaaatcgtcatcggggccccgcattgggcccctggccctgcctgaggaccac tacgagaggaccaccccggacggcagtatcggagagatggagcacccggagaacgatctc aggcctctgcctgatgtggccatgactgggaactgcacccatgagtgtaccgagttcggc cactccgacgcctgctggatgcctggccagccctcccccaatcgtaagagctccaccaag aacgcccccaagctctccaccttcgtgccttacctggagagtgaggggcaggaccacctc ttggccaacggcagtcccaagcccatggcagacgagcgtgggagtgctggaggtggcagc ggaggctccaaggtggctaacatccgcttcctgcccccttacagcagtgccttctccggg ggcagcgactccggcaaaggctgcgaggagatccccctgagccaggcagccgagtaccat tccgccaccacacccaccaaccagggctccaagagagagatttacctgtga

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